RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 MMS22LQ6ZRQ5 1243 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 XYLT1Q86Y38 959 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 NEK11Q8NG66 645 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 PRCCQ92733 491 aaPredicted RBP34.35■■■■□ 3.09
CBX4-203ENST00000494546 SIPA1Q96FS4 1042 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 HSD3B7Q9H2F3 369 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 NOCTQ9UK39 431 aaKnown RBP34.35■■■■□ 3.09
CBX4-203ENST00000494546 DAAM1Q9Y4D1 1078 aa34.35■■■■□ 3.09
CBX4-203ENST00000494546 NDUFS2O75306 463 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 CSKP41240 450 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 COPAP53621 1224 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 ZNF677Q86XU0 584 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 SYT12Q8IV01 421 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 PRMT1Q99873 361 aaKnown RBP34.34■■■■□ 3.09
CBX4-203ENST00000494546 INTS6Q9UL03 887 aaKnown RBP34.34■■■■□ 3.09
CBX4-203ENST00000494546 STAP1Q9ULZ2 295 aa34.34■■■■□ 3.09
CBX4-203ENST00000494546 NUP205Q92621 2012 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 LRRC10BA6NIK2 292 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 GOLGA8SH3BPF8 625 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 ATP1A3P13637 1013 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 ITPKAP23677 461 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 STAT1P42224 750 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 SULT1E1P49888 294 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 LIMK1P53667 647 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 NOMO3P69849 1222 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 STPG1Q5TH74 334 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 IL31Q6EBC2 164 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 METTL3Q86U44 580 aaKnown RBP34.33■■■■□ 3.09
CBX4-203ENST00000494546 EDEM2Q9BV94 578 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 TMEM74BQ9NUR3 256 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 RRN3Q9NYV6 651 aa34.33■■■■□ 3.09
CBX4-203ENST00000494546 KIAA1522Q9P206 1035 aaPredicted RBP34.33■■■■□ 3.09
CBX4-203ENST00000494546 ACADMP11310 421 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 SCNN1AP37088 669 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 CDR2Q01850 454 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 ZNF33AQ06730 810 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 CAMK2GQ13555 558 aaPredicted RBP34.32■■■■□ 3.08
CBX4-203ENST00000494546 PITRM1Q5JRX3 1037 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 OTUD1Q5VV17 481 aaPredicted RBP34.32■■■■□ 3.08
CBX4-203ENST00000494546 APTXQ7Z2E3 356 aaKnown RBP34.32■■■■□ 3.08
CBX4-203ENST00000494546 CIR1Q86X95 450 aaPredicted RBP34.32■■■■□ 3.08
CBX4-203ENST00000494546 OR2T3Q8NH03 318 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 TTC17Q96AE7 1141 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 NPY6RQ99463 290 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 ITM2CQ9NQX7 267 aa34.32■■■■□ 3.08
CBX4-203ENST00000494546 USP36Q9P275 1121 aaKnown RBP34.32■■■■□ 3.08
CBX4-203ENST00000494546 MOCS3O95396 460 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 TFE3P19532 575 aaPredicted RBP34.31■■■■□ 3.08
CBX4-203ENST00000494546 CD6P30203 668 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 TPMTP51580 245 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 RABGAP1LQ5R372 815 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 HSPA12BQ96MM6 686 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 ADAM33Q9BZ11 813 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 PIGVQ9NUD9 493 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 PILRBQ9UKJ0 227 aa34.31■■■■□ 3.08
CBX4-203ENST00000494546 LNP1A1A4G5 178 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 ASLP04424 464 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 CHRNB2P17787 502 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 DPP6P42658 865 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 ST8SIA6P61647 398 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 FMO1Q01740 532 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 MTA1Q13330 715 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 TRIM61Q5EBN2 209 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 FBXL22Q6P050 247 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 SLC41A1Q8IVJ1 513 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 CCAR2Q8N163 923 aaKnown RBP34.3■■■■□ 3.08
CBX4-203ENST00000494546 TOE1Q96GM8 510 aaKnown RBP34.3■■■■□ 3.08
CBX4-203ENST00000494546 RPRD1AQ96P16 312 aaPredicted RBP34.3■■■■□ 3.08
CBX4-203ENST00000494546 ERGIC2Q96RQ1 377 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 MUC22E2RYF6 1773 aaPredicted RBP34.3■■■■□ 3.08
CBX4-203ENST00000494546 CKAP5Q14008 2032 aa34.3■■■■□ 3.08
CBX4-203ENST00000494546 MED19A0JLT2 244 aaPredicted RBP34.29■■■■□ 3.08
CBX4-203ENST00000494546 PAGE1O75459 146 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 GGCXP38435 758 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 IRX4P78413 519 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 AUHQ13825 339 aaKnown RBP34.29■■■■□ 3.08
CBX4-203ENST00000494546 TTC39BQ5VTQ0 682 aaPredicted RBP34.29■■■■□ 3.08
CBX4-203ENST00000494546 SND1Q7KZF4 910 aaKnown RBP eCLIP34.29■■■■□ 3.08
CBX4-203ENST00000494546 TBCBQ99426 244 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 SIK2Q9H0K1 926 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 WDCPQ9H6R7 721 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 PRSS16Q9NQE7 514 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 WSB2Q9NYS7 404 aaPredicted RBP34.29■■■■□ 3.08
CBX4-203ENST00000494546 SUN2Q9UH99 717 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 VANGL2Q9ULK5 521 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 HS3ST4Q9Y661 456 aa34.29■■■■□ 3.08
CBX4-203ENST00000494546 CYP1A1P04798 512 aaPredicted RBP34.28■■■■□ 3.08
CBX4-203ENST00000494546 CENPCQ03188 943 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 DEUP1Q05D60 604 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 APCDD1Q8J025 514 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 IGSF8Q969P0 613 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 NT5C3BQ969T7 300 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 TKTL2Q9H0I9 626 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 MTG2Q9H4K7 406 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 EVLQ9UI08 416 aaPredicted RBP34.28■■■■□ 3.08
CBX4-203ENST00000494546 DNAH14Q0VDD8 3507 aa34.28■■■■□ 3.08
CBX4-203ENST00000494546 A0A1B0GVM2 712 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 TCAF2A6NFQ2 919 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 ADCY5O95622 1261 aa34.27■■■■□ 3.08
CBX4-203ENST00000494546 FLT3P36888 993 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms