RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 NIF3L1Q9GZT8 377 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 IQCGQ9H095 443 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 NOD2Q9HC29 1040 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 CD93Q9NPY3 652 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 LZTFL1Q9NQ48 299 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 PAPOLBQ9NRJ5 636 aaKnown RBP8.51□□□□□ -1.05
HDAC6-234ENST00000493923 MMP17Q9ULZ9 603 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 FRMD4BQ9Y2L6 1034 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 ATP8B3O60423 1300 aa8.51□□□□□ -1.05
HDAC6-234ENST00000493923 A0A0A0MRY4 1105 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 EME2A4GXA9 379 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 C5orf60A6NFR6 353 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 A6NHS1 94 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PRRT4C9JH25 899 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 E7ENQ6 273 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 CREB3O43889 395 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 MFAP3LO75121 409 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 TULP3O75386 442 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 KLKB1P03952 638 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 MYL1P05976 194 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ZNF806P0C7X5 589 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 FAM200BP0CF97 657 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 NR1D1P20393 614 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ACO1P21399 889 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PSMC2P35998 433 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 MPLP40238 635 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PEX19P40855 299 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 MDH1P40925 334 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 CCNG1P51959 295 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 KIF11P52732 1056 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 RAD23BP54727 409 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 IFT88Q13099 833 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 CRY1Q16526 586 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 DBN1Q16643 649 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PPM1JQ5JR12 505 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 EGFLAMQ63HQ2 1017 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ANKRD40Q6AI12 368 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 LRIG3Q6UXM1 1119 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 BHLHA9Q7RTU4 235 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 RASSF3Q86WH2 238 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 TTC30AQ86WT1 665 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ZC3H3Q8IXZ2 948 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ANKS4BQ8N8V4 417 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 EIF1ADQ8N9N8 165 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 NOA1Q8NC60 698 aaKnown RBP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PDZD8Q8NEN9 1154 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 TSTD1Q8NFU3 115 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 OLIG1Q8TAK6 271 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 NETO1Q8TDF5 533 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 NSMCE1Q8WV22 266 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 BHMTQ93088 406 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PPP1R14BQ96C90 147 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PLEKHG4BQ96PX9 1271 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 RTKNQ9BST9 563 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 SLC6A17Q9H1V8 727 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 HSD3B7Q9H2F3 369 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 TMEM8AQ9HCN3 771 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 SPHK2Q9NRA0 654 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
HDAC6-234ENST00000493923 PLK2Q9NYY3 685 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 ZFATQ9P243 1243 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 EBF1Q9UH73 591 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 SCML2Q9UQR0 700 aa8.5□□□□□ -1.05
HDAC6-234ENST00000493923 BCLAF3A2AJT9 711 aaKnown RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 GMNCA6NCL1 334 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ENO4A6NNW6 628 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 SLC9A3R1O14745 358 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 GIPC1O14908 333 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 HOXC11O43248 304 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 WFS1O76024 890 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ADH1CP00326 375 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 APODP05090 189 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 HMBSP08397 361 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CISD3P0C7P0 127 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 RARGP13631 454 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ATP1A3P13637 1013 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ZNF18P17022 549 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 BMP6P22004 513 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 GRIA2P42262 883 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 SCTRP47872 440 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 TUBP50607 506 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 PDE6CP51160 858 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 KRT83P78385 493 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CREB5Q02930 508 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 PDCLQ13371 301 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 NR1I3Q14994 352 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 E2F5Q15329 346 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 ANO4Q32M45 955 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 MAP7D1Q3KQU3 841 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 AASDHQ4L235 1098 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 SH2D4BQ5SQS7 431 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 CFAP58Q5T655 872 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 C1QTNF12Q5T7M4 302 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 STPG1Q5TH74 334 aa8.49□□□□□ -1.05
HDAC6-234ENST00000493923 GKAP1Q5VSY0 366 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-234ENST00000493923 NUGGCQ68CJ6 796 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms