RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 HDHD2Q9H0R4 259 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 TTC27Q6P3X3 843 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 RINLQ6ZS11 566 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 CCDC149Q6ZUS6 474 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 ZDHHC13Q8IUH4 622 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 STK40Q8N2I9 435 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SLC35C1Q96A29 364 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 SEPHS2Q99611 448 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 RTFDC1Q9BY42 306 aaPredicted RBP20.53■□□□□ 0.88
RNF40-203ENST00000493683 FBXO28Q9NVF7 368 aa20.53■□□□□ 0.88
RNF40-203ENST00000493683 CKMP06732 381 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 NEK3P51956 506 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 EPHX4Q8IUS5 362 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 ADAM28Q9UKQ2 775 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 RPL26L1Q9UNX3 145 aaKnown RBP20.52■□□□□ 0.88
RNF40-203ENST00000493683 PCDHGC5Q9Y5F6 944 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 CHADO15335 359 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 STX11O75558 287 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 GRK4P32298 578 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 C11orf88Q6PI97 169 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 ETNPPLQ8TBG4 499 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 ROGDIQ9GZN7 287 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 ENTPD7Q9NQZ7 604 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 URODP06132 367 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 FGFR2P21802 821 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 PAICSP22234 425 aaKnown RBP20.52■□□□□ 0.88
RNF40-203ENST00000493683 CLVS1Q8IUQ0 354 aaPredicted RBP20.52■□□□□ 0.88
RNF40-203ENST00000493683 PCSK9Q8NBP7 692 aaKnown RBP20.52■□□□□ 0.88
RNF40-203ENST00000493683 MCOLN3Q8TDD5 553 aa20.52■□□□□ 0.88
RNF40-203ENST00000493683 PAIP1Q9H074 479 aaKnown RBP20.52■□□□□ 0.88
RNF40-203ENST00000493683 HMGCRP04035 888 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 PLD1Q13393 1074 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 POU6F1Q14863 301 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 NET1Q7Z628 596 aaPredicted RBP20.52■□□□□ 0.87
RNF40-203ENST00000493683 SYTL5Q8TDW5 730 aaPredicted RBP20.52■□□□□ 0.87
RNF40-203ENST00000493683 SMARCD1Q96GM5 515 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 TMEM216Q9P0N5 145 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
RNF40-203ENST00000493683 C1orf232A0A0U1RR37 186 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 PIPSLA2A3N6 862 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 RECQL5O94762 991 aaPredicted RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 RPN2P04844 631 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 OR56A5P0C7T3 313 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 MGAT1P26572 445 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 IL12RB1P42701 662 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 RPL14P50914 215 aaKnown RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 SLC9A5Q14940 896 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 LRRC38Q5VT99 294 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 CRELD2Q6UXH1 353 aaPredicted RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 CAMK1DQ8IU85 385 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 BRSK2Q8IWQ3 736 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 KAT2BQ92831 832 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 SLITRK2Q9H156 845 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ASTN2O75129 1339 aaPredicted RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 PSMG1O95456 288 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ABHD2P08910 425 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 HPCAL1P37235 193 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 OAZ1P54368 228 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 SNX32Q86XE0 403 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ADHFE1Q8IWW8 467 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ITFG1Q8TB96 612 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ENKURQ8TC29 256 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ANKRD49Q8WVL7 239 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 TMEM159Q96B96 161 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 TRPC4Q9UBN4 977 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 VAV3Q9UKW4 847 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 VIL1P09327 827 aaKnown RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 PARP6Q2NL67 630 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 MILR1Q7Z6M3 343 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ACER1Q8TDN7 264 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 LIMD1Q9UGP4 676 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 RBAK-RBAKDNI3L0D1 243 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 MYL12BO14950 172 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 SYNCRIPO60506 623 aaKnown RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 TBX4P57082 545 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 SLC6A3Q01959 620 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 TCHHL1Q5QJ38 904 aaPredicted RBP20.51■□□□□ 0.87
RNF40-203ENST00000493683 FAM117BQ6P1L5 589 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 ZNF605Q86T29 641 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 PHACTR4Q8IZ21 702 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 LPCAT1Q8NF37 534 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 TATDN2Q93075 761 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.51■□□□□ 0.87
RNF40-203ENST00000493683 PCDHB5Q9Y5E4 795 aa20.51■□□□□ 0.87
RNF40-203ENST00000493683 BTNL10A8MVZ5 291 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CBX4O00257 560 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 DDX3XO00571 662 aaKnown RBP eCLIP20.5■□□□□ 0.876e-9■■□□□ 13.9
RNF40-203ENST00000493683 PRKCIP41743 596 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 SCNN1BP51168 640 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 RNF43Q68DV7 783 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CREG2Q8IUH2 290 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ULK2Q8IYT8 1036 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 MREGQ8N565 214 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 ZNF614Q8N883 585 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 METTL6Q8TCB7 284 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CKAP2Q8WWK9 683 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 DDX43Q9NXZ2 648 aaKnown RBP20.5■□□□□ 0.87
RNF40-203ENST00000493683 ERVK-10P10266 1014 aa20.5■□□□□ 0.87
RNF40-203ENST00000493683 CYP2C18P33260 490 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms