RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ACTN3Q08043 901 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 SLC1A5Q15758 541 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 SH2D5Q6ZV89 423 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PRPF39Q86UA1 669 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 CTAGE3PQ8IX95 158 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 CCDC33Q8N5R6 958 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PPM1NQ8N819 430 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 RNF34Q969K3 372 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PAIP2Q9BPZ3 127 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 FBXO44Q9H4M3 255 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 KLHL8Q9P2G9 620 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 AP3B1O00203 1094 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 B4GALT3O60512 393 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 CCR1P32246 355 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 MAP2K2P36507 400 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 NEK3P51956 506 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 DNAJC3Q13217 504 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 FRG1Q14331 258 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 LVRNQ6Q4G3 990 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 TRPM8Q7Z2W7 1104 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PID1Q7Z2X4 250 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 PDCD7Q8N8D1 485 aaKnown RBP11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 SEPT10Q9P0V9 454 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
PHACTR4-204ENST00000493669 OR6C75A6NL08 312 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 LPXNO60711 386 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 CCNFP41002 786 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 OR1G1P47890 313 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 SLC39A12Q504Y0 691 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 RNF43Q68DV7 783 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 MARK2Q7KZI7 788 aaKnown RBP11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 CHSY1Q86X52 802 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 NPWQ8N729 165 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 SCAMP5Q8TAC9 235 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 TCP10LQ8TDR4 215 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 CDKL2Q92772 493 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 SERPINB11Q96P15 392 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 GBA3Q9H227 469 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 FNIP2Q9P278 1114 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 F8W810 466 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 PSMD3O43242 534 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 AP2A1O95782 977 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 AMHP03971 560 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 DHRS4L1P0CG22 281 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 DNAJB2P25686 324 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 LIG3P49916 1009 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 CDK7P50613 346 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 MANEALQ5VSG8 457 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 MSANTD2Q6P1R3 559 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 TIFABQ6ZNK6 161 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 MON1AQ86VX9 555 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 CATSPERBQ9H7T0 1116 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 HAUS2Q9NVX0 235 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 PCDHB5Q9Y5E4 795 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
PHACTR4-204ENST00000493669 HOXA2O43364 376 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 EDF1O60869 148 aaKnown RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 TADA2AO75478 443 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 GRK4P32298 578 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 GRIA1P42261 906 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 MRPL58Q14197 206 aaKnown RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 ZKSCAN8Q15776 578 aaPredicted RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 TEX44Q53QW1 395 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 SCD5Q86SK9 330 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 KLHDC8BQ8IXV7 354 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 ABI1Q8IZP0 508 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 MPP5Q8N3R9 675 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 OXCT2Q9BYC2 517 aaPredicted RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 KLHL14Q9P2G3 628 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 NEU3Q9UQ49 428 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 ZNF638Q14966 1978 aaKnown RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 CXorf49A8MYA2 514 aaPredicted RBP11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 TRIM49D1C9J1S8 452 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 SLC2A3P11169 496 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 PLEKHG4Q58EX7 1191 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 ZNF280DQ6N043 979 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 NUP93Q8N1F7 819 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 DEPDC1BQ8WUY9 529 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 DPF3Q92784 378 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 TBC1D31Q96DN5 1066 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 SMYD2Q9NRG4 433 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 ADAM28Q9UKQ2 775 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 GRID1Q9ULK0 1009 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 PHTF1Q9UMS5 762 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 WDR27A2RRH5 827 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 KCNK1O00180 336 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 COPEO14579 308 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 CSH1P0DML2 217 aa11.07□□□□□ -0.64
PHACTR4-204ENST00000493669 CSH2P0DML3 217 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms