RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 CPXM1Q96SM3 734 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 THAP9Q9H5L6 903 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 PLCB1Q9NQ66 1216 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 DNAJC12Q9UKB3 198 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 SLCO1B1Q9Y6L6 691 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 PCNX2A6NKB5 2137 aa15.17■□□□□ 0.02
ATG4B-223ENST00000493618 H0Y626 953 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 IGLV3-25P01717 112 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 DNTTP04053 509 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 ST8SIA6P61647 398 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 SIM1P81133 766 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-223ENST00000493618 MEA1Q16626 185 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 MAN2A1Q16706 1144 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 OR6B2Q6IFH4 312 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 FAM183BPQ6ZVS7 135 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-223ENST00000493618 APCDD1Q8J025 514 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 C1orf131Q8NDD1 294 aaKnown RBP15.16■□□□□ 0.02
ATG4B-223ENST00000493618 TTC17Q96AE7 1141 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 MRGPRX3Q96LB0 322 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 FAM81BQ96LP2 452 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 IRX2Q9BZI1 471 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-223ENST00000493618 IL21RQ9HBE5 538 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 DNAAF2Q9NVR5 837 aaKnown RBP15.16■□□□□ 0.02
ATG4B-223ENST00000493618 SUN2Q9UH99 717 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 ERVW-1Q9UQF0 538 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 CHD8Q9HCK8 2581 aa15.16■□□□□ 0.02
ATG4B-223ENST00000493618 CACNA1EQ15878 2313 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 TTC34A8MYJ7 566 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 C1QTNF9BB2RNN3 333 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 FOXN3O00409 490 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 BCAT2O15382 392 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 HYAL3O43820 417 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 SH3BP5O60239 455 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 SIN3BO75182 1162 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 ERBB2P04626 1255 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 C1QTNF9P0C862 333 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 CLCN1P35523 988 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 BNC1Q01954 994 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 PTK2Q05397 1052 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 ZNF776Q68DI1 518 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 SLC47A2Q86VL8 602 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 ZNF557Q8N988 423 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-223ENST00000493618 GANCQ8TET4 914 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 RNF34Q969K3 372 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 BTN2A3PQ96KV6 586 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 SCNM1Q9BWG6 230 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 DDIT4Q9NX09 232 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 PCDHGC3Q9UN70 934 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 WASF3Q9UPY6 502 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 CEP83Q9Y592 693 aa15.15■□□□□ 0.02
ATG4B-223ENST00000493618 AKAP13Q12802 2813 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 A0A1B0GVT2 93 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 GTPBP10A4D1E9 387 aaKnown RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 KCNU1A8MYU2 1149 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 UPK3BL1B0FP48 263 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 UPK3BL2E5RIL1 263 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 F5H5T6 163 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 PES1O00541 588 aaKnown RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 GJB3O75712 270 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 FSBPO95073 299 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 SEMA4FO95754 770 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 ASLP04424 464 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 GGCXP38435 758 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 STK19P49842 368 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 CDK17Q00537 523 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 NME3Q13232 169 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 VWA3BQ502W6 1294 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 MIIPQ5JXC2 388 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 LAYNQ6UX15 382 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 RPL10LQ96L21 214 aaKnown RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 SLC2A13Q96QE2 648 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 BTBD1Q9H0C5 482 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 RSPH9Q9H1X1 276 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 FBRSQ9HAH7 460 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 KIAA1522Q9P206 1035 aaPredicted RBP15.14■□□□□ 0.01
ATG4B-223ENST00000493618 SLCO3A1Q9UIG8 710 aa15.14■□□□□ 0.01
ATG4B-223ENST00000493618 FAM47DPA6NHR8 397 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 HSF2BPO75031 334 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 MOCS3O95396 460 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 PDGFRAP16234 1089 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 MZF1P28698 734 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 KRT9P35527 623 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 CSNK1EP49674 416 aaKnown RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 IRAK1P51617 712 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 CENPCQ03188 943 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 EIF4EBP2Q13542 120 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 RAPGEF1Q13905 1077 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 HNRNPA1L2Q32P51 320 aaKnown RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 TTC31Q49AM3 519 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 EFHC1Q5JVL4 640 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 DPY19L2P1Q6NXN4 242 aa15.13■□□□□ 0.01
ATG4B-223ENST00000493618 C11orf57Q6ZUT1 292 aaPredicted RBP15.13■□□□□ 0.01
ATG4B-223ENST00000493618 MMAAQ8IVH4 418 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms