RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 BST2Q10589 180 aaKnown RBP18.36■□□□□ 0.53
NUP50-218ENST00000493456 CST6Q15828 149 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 GOLGA7BQ2TAP0 167 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 SLC45A4Q5BKX6 768 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 PRAMEF14Q5SWL7 426 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 NUGGCQ68CJ6 796 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 UNC45BQ8IWX7 931 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 SIX6OS1Q8N1H7 587 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 CACTIN-AS1Q8N1I8 211 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 SCML4Q8N228 414 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 EID2Q8N6I1 236 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 FBXL13Q8NEE6 735 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 NDRG1Q92597 394 aaKnown RBP18.36■□□□□ 0.53
NUP50-218ENST00000493456 EDEM1Q92611 657 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 ERVMER34-1Q9H9K5 563 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 EBF2Q9HAK2 575 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 HESX1Q9UBX0 185 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 SERGEFQ9UGK8 458 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 PTPRQQ9UMZ3 2332 aa18.36■□□□□ 0.53
NUP50-218ENST00000493456 A0A1W2PR77 199 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 TYW5A2RUC4 315 aaKnown RBP18.35■□□□□ 0.53
NUP50-218ENST00000493456 YJEFN3A6XGL0 299 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 C10orf142B7Z368 130 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 E7ENQ6 273 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 MID1O15344 667 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 MSI1O43347 362 aaKnown RBP18.35■□□□□ 0.53
NUP50-218ENST00000493456 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
NUP50-218ENST00000493456 PLA2G2AP14555 144 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 MXI1P50539 228 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 MCCD1P59942 119 aaPredicted RBP18.35■□□□□ 0.53
NUP50-218ENST00000493456 SGO2Q562F6 1265 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 ATL3Q6DD88 541 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 MSANTD2Q6P1R3 559 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 GPR155Q7Z3F1 870 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 FGF11Q92914 225 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 TATDN2Q93075 761 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
NUP50-218ENST00000493456 OMDQ99983 421 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 NEUROG2Q9H2A3 272 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 CNGB3Q9NQW8 809 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 RAB20Q9NX57 234 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 USP25Q9UHP3 1055 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 RAI2Q9Y5P3 530 aa18.35■□□□□ 0.53
NUP50-218ENST00000493456 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
NUP50-218ENST00000493456 CAPN8A6NHC0 703 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
NUP50-218ENST00000493456 STX10O60499 249 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 IGLV3-27P01718 113 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 CSKP41240 450 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 RXRGP48443 463 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 NXPH1P58417 271 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 KCNJ12Q14500 433 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 FAM133BQ5BKY9 247 aaKnown RBP18.34■□□□□ 0.53
NUP50-218ENST00000493456 RFWD3Q6PCD5 774 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 ZNF605Q86T29 641 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 DHX40Q8IX18 779 aaKnown RBP18.34■□□□□ 0.53
NUP50-218ENST00000493456 HJURPQ8NCD3 748 aaPredicted RBP18.34■□□□□ 0.53
NUP50-218ENST00000493456 KCTD13Q8WZ19 329 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 RFFLQ8WZ73 363 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 AZIN2Q96A70 460 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 LMLNQ96KR4 655 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 MTG2Q9H4K7 406 aa18.34■□□□□ 0.53
NUP50-218ENST00000493456 TLR4O00206 839 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 ACSL4O60488 711 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 SRPRAP08240 638 aaKnown RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 SETSIPP0DME0 302 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 ACTN2P35609 894 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 ADPRHP54922 357 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 DAOAP59103 153 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 ADAM9Q13443 819 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 FOXD4L6Q3SYB3 417 aaPredicted RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 C9orf64Q5T6V5 341 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 SFMBT2Q5VUG0 894 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 FOXD4L3Q6VB84 417 aaPredicted RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 SND1Q7KZF4 910 aaKnown RBP eCLIP18.33■□□□□ 0.52
NUP50-218ENST00000493456 MMAAQ8IVH4 418 aaKnown RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 CCDC117Q8IWD4 279 aaPredicted RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 ZNF843Q8N446 348 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 SERAC1Q96JX3 654 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 MRGPRX3Q96LB0 322 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 DDX50Q9BQ39 737 aaKnown RBP18.33■□□□□ 0.52
NUP50-218ENST00000493456 CFAP45Q9UL16 551 aa18.33■□□□□ 0.52
NUP50-218ENST00000493456 ITIH6Q6UXX5 1313 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 EDDM13A0A1B0GTR0 161 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 BRINP1O60477 761 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 RHOBTB3O94955 611 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 ADH1BP00325 375 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 GOT1P17174 413 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 CKMT2P17540 419 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 SLC6A4P31645 630 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 SLC8A1P32418 973 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 YWHAEP62258 255 aaKnown RBP18.32■□□□□ 0.52
NUP50-218ENST00000493456 CDH18Q13634 790 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 GUF1Q8N442 669 aaKnown RBP18.32■□□□□ 0.52
NUP50-218ENST00000493456 IRGQQ8WZA9 623 aa18.32■□□□□ 0.52
NUP50-218ENST00000493456 PRICKLE1Q96MT3 831 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms