RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 ARL13BQ3SXY8 428 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC122Q5T0U0 273 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 KIAA0907Q7Z7F0 614 aaPredicted RBP16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 C14orf80Q86SX3 495 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CIR1Q86X95 450 aaPredicted RBP16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 AHI1Q8N157 1196 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NELL1Q92832 810 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 IGSF8Q969P0 613 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 C1orf74Q96LT6 269 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HHIPQ96QV1 700 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CIPCQ9C0C6 399 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MRPL47Q9HD33 250 aaKnown RBP16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZSCAN32Q9NX65 697 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ELOVL2Q9NXB9 296 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NENFQ9UMX5 172 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SNX10Q9Y5X0 201 aa16.81■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TIMM44O43615 452 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ADAM23O75077 832 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 PSMA2P25787 234 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NTSR1P30989 418 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HOXA6P31267 233 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CD70P32970 193 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 OGDHQ02218 1023 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 GFPT1Q06210 699 aaPredicted RBP16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 LMAN2Q12907 356 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ASTE1Q2TB18 679 aaPredicted RBP16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 C5orf22Q49AR2 442 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TMEM215Q68D42 235 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 LRRC31Q6UY01 552 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CHPFQ8IZ52 775 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCAR2Q8N163 923 aaKnown RBP16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CAMKK1Q8N5S9 505 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 LMLNQ96KR4 655 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 THAP2Q9H0W7 228 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 PCDHGA2Q9Y5H1 932 aa16.8■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ATG2BQ96BY7 2078 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TMEM191CA6NGB0 347 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 E9PAM4 449 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NPC1O15118 1278 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 APBB3O95704 486 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HOXC13P31276 330 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ADRA1BP35368 520 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 WASP42768 502 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 IRAK1P51617 712 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DGKEP52429 567 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DMWDQ09019 674 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CRY1Q16526 586 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FUT11Q495W5 492 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FSCBQ5H9T9 825 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MBLAC2Q68D91 279 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SDE2Q6IQ49 451 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZNF683Q8IZ20 524 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC185Q8N715 623 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZBTB44Q8NCP5 570 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TSTD1Q8NFU3 115 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FNIP1Q8TF40 1166 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NTAN1Q96AB6 310 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ACOX2Q99424 681 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CHP1Q99653 195 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 KIAA1522Q9P206 1035 aaPredicted RBP16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 THAP10Q9P2Z0 257 aaPredicted RBP16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 R4GN57 208 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CACNA1IQ9P0X4 2223 aa16.79■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 IGLV3-10A0A075B6K4 115 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 AKR1B10O60218 316 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CLDN11O75508 207 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HOXB2P14652 356 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NBL1P41271 181 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 FNTBP49356 437 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CDH4P55283 916 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 OXCT1P55809 520 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 NRG1Q02297 640 aaPredicted RBP16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZNF252P-AS1Q0IIN9 211 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ZNF177Q13360 481 aaPredicted RBP16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 HEATR6Q6AI08 1181 aaKnown RBP16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SCYL2Q6P3W7 929 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TMEM92Q6UXU6 159 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 WDR5BQ86VZ2 330 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 LONP2Q86WA8 852 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TC2NQ8N9U0 490 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 ATRIPQ8WXE1 791 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SORCS1Q8WY21 1168 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 GABRG3Q99928 467 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 TRIM7Q9C029 511 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 OSBPL2Q9H1P3 480 aa16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 POLMQ9NP87 494 aaPredicted RBP16.78■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CCDC163A0A0D9SF12 145 aa16.77■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 DRGXA6NNA5 263 aa16.77■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 SRGAP2O75044 1071 aa16.77■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CNTN5O94779 1100 aa16.77■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 MOCS3O95396 460 aa16.77■□□□□ 0.28
MSH5-SAPCD1-206ENST00000491552 CYP1A2P05177 515 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms