RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CNGB3Q9NQW8 809 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 MAN1C1Q9NR34 630 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 IL37Q9NZH6 218 aa23.48■■□□□ 1.35
USF3-203ENST00000491165 DRG1Q9Y295 367 aaKnown RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.48■■□□□ 1.35
USF3-203ENST00000491165 ZSCAN5DPP0CG00 497 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 PECAM1P16284 738 aaPredicted RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 GCAP28676 217 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 WDR4P57081 412 aaKnown RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 RPL10AP62906 217 aaKnown RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 ZNF252P-AS1Q0IIN9 211 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 MORF4L2Q15014 288 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 PAIP2Q9BPZ3 127 aaKnown RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 ADAM33Q9BZ11 813 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 MAGED2Q9UNF1 606 aaPredicted RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 SIGLEC16A6NMB1 481 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 SLC38A8A6NNN8 435 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 NDC80O14777 642 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 FYNP06241 537 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 KRT3P12035 628 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 HMGA1P17096 107 aaKnown RBP23.47■■□□□ 1.35
USF3-203ENST00000491165 PTPN7P35236 360 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 CCDC15Q0P6D6 951 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 TLE6Q9H808 572 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 WDR35Q9P2L0 1181 aa23.47■■□□□ 1.35
USF3-203ENST00000491165 PRPF4O43172 522 aaKnown RBP eCLIP23.46■■□□□ 1.35
USF3-203ENST00000491165 OBSL1O75147 1896 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 ASMTLO95671 621 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 ALDH1A3P47895 512 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 DCUN1D2Q6PH85 259 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 SLC26A9Q7LBE3 791 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 FAM161BQ96MY7 647 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 CXorf56Q9H5V9 222 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 NMUR1Q9HB89 426 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 ARHGEF3Q9NR81 526 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 OSER1Q9NX31 292 aa23.46■■□□□ 1.35
USF3-203ENST00000491165 FAM92AA1XBS5 289 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 POC1B-GALNT4F8VUJ3 575 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 ALADP13716 330 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 ETS1P14921 441 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 SLC18A1P54219 525 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 VCPP55072 806 aaKnown RBP23.45■■□□□ 1.35
USF3-203ENST00000491165 MGAT5Q09328 741 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 KCNC3Q14003 757 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 DUSP6Q16828 381 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 ZDHHC17Q8IUH5 632 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 FAM149B1Q96BN6 582 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 TRABDQ9H4I3 376 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 SENP1Q9P0U3 644 aa23.45■■□□□ 1.35
USF3-203ENST00000491165 hCG_1818297A0A087WSY0 165 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 SPAG7O75391 227 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 SKIV2L2P42285 1042 aaKnown RBP23.45■■□□□ 1.34
USF3-203ENST00000491165 RAB6CQ53S08 254 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 TFDP3Q5H9I0 405 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 FAM47EQ6ZV65 393 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 ASRGL1Q7L266 308 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 SCD5Q86SK9 330 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 RAB6CQ9H0N0 254 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 VPS37BQ9H9H4 285 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 DDX56Q9NY93 547 aaKnown RBP23.45■■□□□ 1.34
USF3-203ENST00000491165 MAFFQ9ULX9 164 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 SMG5Q9UPR3 1016 aaKnown RBP23.45■■□□□ 1.34
USF3-203ENST00000491165 ANAPC1Q9H1A4 1944 aa23.45■■□□□ 1.34
USF3-203ENST00000491165 KRT15P19012 456 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 TFE3P19532 575 aaPredicted RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 TAF10Q12962 218 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 ADGRE1Q14246 886 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 PIGHQ14442 188 aaPredicted RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 SPARCL1Q14515 664 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 FASTKD3Q14CZ7 662 aaKnown RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 OASLQ15646 514 aaKnown RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 RNASEH2BQ5TBB1 312 aaKnown RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 ZNF697Q5TEC3 545 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 NKD2Q969F2 451 aaPredicted RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 PPCSQ9HAB8 311 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 SHOC2Q9UQ13 582 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 STARD13Q9Y3M8 1113 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 NOTCH4Q99466 2003 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 NRG2O14511 850 aaPredicted RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 ITGAVP06756 1048 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 KRT16P08779 473 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 CCNB1P14635 433 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 PITX1P78337 314 aaPredicted RBP23.44■■□□□ 1.34
USF3-203ENST00000491165 SH3PXD2AQ5TCZ1 1133 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 SYPL2Q5VXT5 272 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 CENPUQ71F23 418 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 KIF2BQ8N4N8 673 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 DENND1AQ8TEH3 1009 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 FBF1Q8TES7 1133 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 SMC6Q96SB8 1091 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 TTLL2Q9BWV7 592 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 PCDH9Q9HC56 1237 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 GMIPQ9P107 970 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 SCML2Q9UQR0 700 aa23.44■■□□□ 1.34
USF3-203ENST00000491165 C2CD4BA6NLJ0 364 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 ALOX15BO15296 676 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 CCL16O15467 120 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 FBXO21O94952 628 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 YWHAQP27348 245 aa23.43■■□□□ 1.34
USF3-203ENST00000491165 HP1BP3Q5SSJ5 553 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms