RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 VSIG1Q86XK7 387 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 ETFBKMTQ8IXQ9 262 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 GJD3Q8N144 294 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 CFAP52Q8N1V2 620 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 HJURPQ8NCD3 748 aaPredicted RBP18.81■□□□□ 0.6
PRDM2-209ENST00000491134 FAF2Q96CS3 445 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 TMA16Q96EY4 203 aaKnown RBP18.81■□□□□ 0.6
PRDM2-209ENST00000491134 ALS2CR12Q96Q35 445 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 TLR10Q9BXR5 811 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 KLHL11Q9NVR0 708 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 DDX56Q9NY93 547 aaKnown RBP18.81■□□□□ 0.6
PRDM2-209ENST00000491134 CLEC4EQ9ULY5 219 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 SORCS3Q9UPU3 1222 aa18.81■□□□□ 0.6
PRDM2-209ENST00000491134 WASH4PA8MWX3 477 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 MIF4GDA9UHW6 222 aaKnown RBP18.8■□□□□ 0.6
PRDM2-209ENST00000491134 ZNF487B1APH4 448 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 CACNG3O60359 315 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 ADH1CP00326 375 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 ADH5P11766 374 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 GOT1P17174 413 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 KDELR1P24390 212 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 GJC1P36383 396 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 CDH6P55285 790 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 MMRN1Q13201 1228 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 PDK2Q15119 407 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 ZNF569Q5MCW4 686 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 RABGAP1LQ5R372 815 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 TTC39BQ5VTQ0 682 aaPredicted RBP18.8■□□□□ 0.6
PRDM2-209ENST00000491134 DCAF12L1Q5VU92 463 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 SLC35F6Q8N357 371 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 CPA6Q8N4T0 437 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 TBC1D31Q96DN5 1066 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 LMLNQ96KR4 655 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 RPRD1AQ96P16 312 aaPredicted RBP18.8■□□□□ 0.6
PRDM2-209ENST00000491134 CSPG4P5Q96PW8 444 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 EPAS1Q99814 870 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 PLK2Q9NYY3 685 aa18.8■□□□□ 0.6
PRDM2-209ENST00000491134 RCOR3Q9P2K3 495 aaPredicted RBP18.8■□□□□ 0.6
PRDM2-209ENST00000491134 PI4K2BG5E9Z4 385 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 FANCGO15287 622 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 CREB3O43889 395 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 TBL1XO60907 577 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 SRGAP2O75044 1071 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 TNNT1P13805 278 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 TYRP14679 529 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 GJA4P35212 333 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 OPRD1P41143 372 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 GAD2Q05329 585 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 PPP6R3Q5H9R7 873 aaPredicted RBP18.79■□□□□ 0.6
PRDM2-209ENST00000491134 ASTLQ6HA08 431 aaPredicted RBP18.79■□□□□ 0.6
PRDM2-209ENST00000491134 LRRC31Q6UY01 552 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 CHST9Q7L1S5 443 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 C12orf40Q86WS4 652 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
PRDM2-209ENST00000491134 PHTF2Q8N3S3 785 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 EXD1Q8NHP7 514 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 WFDC5Q8TCV5 224 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 BBS2Q9BXC9 721 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 ZYG11BQ9C0D3 744 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 RETREG1Q9H6L5 497 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 MPP6Q9NZW5 540 aa18.79■□□□□ 0.6
PRDM2-209ENST00000491134 A0A1B0GVM2 712 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 TCAF2A6NFQ2 919 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 NEDD8-MDP1E9PL57 170 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 EEF2KO00418 725 aaKnown RBP18.78■□□□□ 0.6
PRDM2-209ENST00000491134 DCLK1O15075 740 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 KIF5CO60282 957 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 CISD3P0C7P0 127 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 RHOQP17081 205 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 DEKP35659 375 aaKnown RBP18.78■□□□□ 0.6
PRDM2-209ENST00000491134 CDKN2BP42772 138 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 CDH4P55283 916 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 MESP2Q0VG99 397 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
PRDM2-209ENST00000491134 CXorf57Q6NSI4 855 aaKnown RBP18.78■□□□□ 0.6
PRDM2-209ENST00000491134 MFSD7Q6UXD7 560 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 RFX8Q6ZV50 586 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 NYAP1Q6ZVC0 841 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 KCTD6Q8NC69 237 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 TTC8Q8TAM2 541 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 DDI1Q8WTU0 396 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 BHMTQ93088 406 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 WDR24Q96S15 920 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 ZNF670Q9BS34 389 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 KLC2Q9H0B6 622 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 ARHGEF4Q9NR80 690 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 NDFIP2Q9NV92 336 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 TMEM248Q9NWD8 314 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 TBC1D30Q9Y2I9 924 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 JRKLQ9Y4A0 524 aa18.78■□□□□ 0.6
PRDM2-209ENST00000491134 LRRD1A4D1F6 860 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 H3BRJ5 948 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 CLDN11O75508 207 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.6
PRDM2-209ENST00000491134 KRT1P04264 644 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 CYBBP04839 570 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 EPHB2P29323 1055 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 SOX9P48436 509 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 RWDD2BP57060 319 aa18.77■□□□□ 0.6
PRDM2-209ENST00000491134 TPI1P60174 286 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms