RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 ANGPTL2Q9UKU9 493 aa7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 STARD13Q9Y3M8 1113 aa7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 NUP205Q92621 2012 aa7.64□□□□□ -1.19
PRPF4B-208ENST00000490653 FASNP49327 2511 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 FAM208BQ5VWN6 2430 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 SMG1Q96Q15 3661 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 CEP192Q8TEP8 1941 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 ADAMTS9Q9P2N4 1935 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 BICDL2A1A5D9 508 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 M0QYV0 167 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 P4HA2O15460 535 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 RHOBTB1O94844 696 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 CAVIN2O95810 425 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 CAPNS1P04632 268 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 PAEPP09466 180 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 PNMA6AP0CW24 399 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 HOXB2P14652 356 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 TRIM21P19474 475 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 TBXAS1P24557 533 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 SLC6A4P31645 630 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 IL12RB1P42701 662 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 GPD2P43304 727 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 DHPSP49366 369 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 YWHAEP62258 255 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 PITX1P78337 314 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 IRX4P78413 519 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 TAF5Q15542 800 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 ARHGAP44Q17R89 818 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 AASDHQ4L235 1098 aaPredicted RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 SYPL2Q5VXT5 272 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 RFWD3Q6PCD5 774 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 RSRC2Q7L4I2 434 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 TTC39CQ8N584 583 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 WFDC5Q8TCV5 224 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 IPO4Q8TEX9 1081 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 ZNF606Q8WXB4 792 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 PIGKQ92643 395 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 GATA6Q92908 595 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 XPO6Q96QU8 1125 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 GTPBP4Q9BZE4 634 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 SIX2Q9NPC8 291 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 BCCIPQ9P287 314 aaKnown RBP eCLIP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 XPO7Q9UIA9 1087 aaKnown RBP7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 RWDD2AQ9UIY3 292 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 KIAA1257Q9ULG3 409 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 CNTN6Q9UQ52 1028 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 NAALADL1Q9UQQ1 740 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 LAMA5O15230 3695 aa7.63□□□□□ -1.19
PRPF4B-208ENST00000490653 NBEAQ8NFP9 2946 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ATXN2Q99700 1313 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 IGHV1OR15-9A0A0B4J2B8 117 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CDX4O14627 284 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 PAPSS1O43252 624 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 LETM1O95202 739 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 GNA14O95837 355 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 SETSIPP0DME0 302 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 KRT5P13647 590 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 HLA-EP13747 358 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ITPKAP23677 461 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 PON1P27169 355 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 MAOBP27338 520 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 USP8P40818 1118 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 PPP1R2P41236 205 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 PI4KAP42356 2102 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CHRNA4P43681 627 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 RPL34P49207 117 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 NUMBP49757 651 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 GOLGA8FQ08AF8 430 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 GOLGA8DPQ0D2H9 430 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 NADSYN1Q6IA69 706 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 FIGNL1Q6PIW4 674 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 FOXR2Q6PJQ5 311 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 SLC41A1Q8IVJ1 513 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 FAM217AQ8IXS0 508 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CHPFQ8IZ52 775 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 SIX6OS1Q8N1H7 587 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ARHGAP18Q8N392 663 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ZNF366Q8N895 744 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 C12orf50Q8NA57 414 aaPredicted RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 DDI1Q8WTU0 396 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 RNF139Q8WU17 664 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CYB5D2Q8WUJ1 264 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 GABRG3Q99928 467 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 DCLK3Q9C098 648 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CLSTN2Q9H4D0 955 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 MTG2Q9H4K7 406 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CNGB3Q9NQW8 809 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ABCC13Q9NSE7 274 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 SAMSN1Q9NSI8 373 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 LMBRD1Q9NUN5 540 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 NOP53Q9NZM5 478 aaKnown RBP7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 CALCOCO1Q9P1Z2 691 aa7.62□□□□□ -1.19
PRPF4B-208ENST00000490653 THAP10Q9P2Z0 257 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms