RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ZSCAN5CA6NGD5 496 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 FGF19O95750 216 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ADH1CP00326 375 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 BEND6Q5SZJ8 279 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 TTC39BQ5VTQ0 682 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SLC4A11Q8NBS3 891 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCYT2Q99447 389 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 EFHD1Q9BUP0 239 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ADAMTS5Q9UNA0 930 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PAGE1O75459 146 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PIGRP01833 764 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 GTF2A1P52655 376 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 MMRN1Q13201 1228 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 DDX39BQ13838 428 aaKnown RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ANKRD20A8PQ5CZ79 823 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 AGAP9Q5VTM2 703 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 STRA8Q7Z7C7 330 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM167BQ9BTA0 163 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 MARCOQ9UEW3 520 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 COL6A1P12109 1028 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 STMN1P16949 149 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 HNRNPH3P31942 346 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 PPP3CCP48454 512 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 POU5F1Q01860 360 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 RFX8Q6ZV50 586 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 STRADAQ7RTN6 431 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 PNKPQ96T60 521 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 SEMA3CQ99985 751 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 APOBEC3GQ9HC16 384 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 UTP6Q9NYH9 597 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 LNPEPQ9UIQ6 1025 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 NEDD8-MDP1E9PL57 170 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZBTB22O15209 634 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 VAPBO95292 243 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 POU4F1Q01851 419 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 LPIN1Q14693 890 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 RARS2Q5T160 578 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 BTN2A3PQ96KV6 586 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZCCHC2Q9C0B9 1178 aaKnown RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 TXLNGQ9NUQ3 528 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 COL2A1P02458 1487 aaPredicted RBP14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 NUP188Q5SRE5 1749 aa14.71□□□□□ -0.05
ARHGEF39-205ENST00000490638 NOL3O60936 208 aaKnown RBP14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 ERBB2P04626 1255 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 ATP4AP20648 1035 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 IFNA8P32881 189 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 NOVP48745 357 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 FAM187BQ17R55 369 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 SLC45A4Q5BKX6 768 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 GLT6D1Q7Z4J2 308 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 NCLNQ969V3 563 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 PPP1R16AQ96I34 528 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 SERPINI1Q99574 410 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 C1QTNF7Q9BXJ2 289 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 L3MBTL1Q9Y468 752 aa14.71□□□□□ -0.06
ARHGEF39-205ENST00000490638 MAGEB16A2A368 324 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 GMNCA6NCL1 334 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 PFKMP08237 780 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 CORO1AP31146 461 aaKnown RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MGAT5Q09328 741 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 TRADDQ15628 312 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 C6orf10Q5SRN2 563 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 NLRP9Q7RTR0 991 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ARL14EPQ8N8R7 260 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 RIPOR3Q96MK2 946 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 PRKD2Q9BZL6 878 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MYH13Q9UKX3 1938 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 TMEM191CA6NGB0 347 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 C1QTNF3-AMACRE9PGA6 284 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ALDH1A2O94788 518 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 SUPT7LO94864 414 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 CYP2A6P11509 494 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MSH3P20585 1137 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 IRF5Q13568 498 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 PLCL1Q15111 1095 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 RAB30Q15771 203 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MYO1HQ8N1T3 1032 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 PIK3R5Q8WYR1 880 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 TFAP2BQ92481 460 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 SHISA4Q96DD7 197 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 SGSM3Q96HU1 749 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 FUBP3Q96I24 572 aaKnown RBP eCLIP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 CLDND1Q9NY35 253 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MYADML2A6NDP7 307 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 CCNB1P14635 433 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ITGB6P18564 788 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 MZF1P28698 734 aaPredicted RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 ELK3P41970 407 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 NPNTQ6UXI9 565 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 TRMT11Q7Z4G4 463 aaKnown RBP14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 COG4Q9H9E3 785 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 SYTL2Q9HCH5 934 aa14.7□□□□□ -0.06
ARHGEF39-205ENST00000490638 IFRD1O00458 451 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms