RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GRM8O00222 908 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 STX16O14662 325 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 RRHO14718 337 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 CNTN5O94779 1100 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 SGPL1O95470 568 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ALDOCP09972 364 aaKnown RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 RFPL3SP0C7P2 107 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 CHN1P15882 459 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 TGM2P21980 687 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 PNPLA4P41247 253 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 INHBEP58166 350 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 SHC2P98077 582 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 SLC12A1Q13621 1099 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ANKRD1Q15327 319 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 SEC23BQ15437 767 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ANXA2RQ3ZCQ2 193 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ZNF484Q5JVG2 852 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 DHRS13Q6UX07 377 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ZNF782Q6ZMW2 699 aaPredicted RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 LRRTM4Q86VH4 590 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ENDOVQ8N8Q3 282 aaKnown RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 C8orf58Q8NAV2 365 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 OSR1Q8TAX0 266 aaPredicted RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 HERVK_113Q902F9 699 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 PIGKQ92643 395 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 C5orf34Q96MH7 638 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 FCRL5Q96RD9 977 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ABHD14AQ9BUJ0 271 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 GATA5Q9BWX5 397 aaPredicted RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 ARHGAP39Q9C0H5 1083 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 OSBPL5Q9H0X9 879 aaPredicted RBP4.38□□□□□ -1.71
CD46-216ENST00000490278 RMI1Q9H9A7 625 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 ERVK-5Q9HDB9 667 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 PI4KBQ9UBF8 816 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 DNAJC16Q9Y2G8 782 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 EMSYQ7Z589 1322 aa4.38□□□□□ -1.71
CD46-216ENST00000490278 RRN3P2A6NIE6 340 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 OVOL3O00110 214 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 CNPP09543 421 aaKnown RBP4.37□□□□□ -1.71
CD46-216ENST00000490278 ACP5P13686 325 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 AKR1A1P14550 325 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 SOX2P48431 317 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 UBE3AQ05086 875 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 CDK18Q07002 472 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 ZNF268Q14587 947 aaPredicted RBP4.37□□□□□ -1.71
CD46-216ENST00000490278 GPR162Q16538 588 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 ALFQ53S48 1182 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 ZNF66Q6ZN08 573 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 RHPN2Q8IUC4 686 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 CPOQ8IVL8 374 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 USP38Q8NB14 1042 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 TBATAQ96M53 351 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 TWNKQ96RR1 684 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 SLITRK6Q9H5Y7 841 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 MTMR4Q9NYA4 1195 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 C11orf21Q9P2W6 132 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 GJD2Q9UKL4 321 aa4.37□□□□□ -1.71
CD46-216ENST00000490278 WIPF3A6NGB9 483 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 INPPL1O15357 1258 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 USP12O75317 370 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 LATS1O95835 1130 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 PLAUP00749 431 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 PYGLP06737 847 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 CSF1P09603 554 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 ST6GAL1P15907 406 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 PRPH2P23942 346 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 CNTFP26441 200 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 B4GALNT1Q00973 533 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 FOXF2Q12947 444 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 MTA1Q13330 715 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 ALKBH1Q13686 389 aaKnown RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 THOC5Q13769 683 aaKnown RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 SMN1Q16637 294 aaKnown RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 MAP3K21Q5TCX8 1036 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 ZNF474Q6S9Z5 364 aaPredicted RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 ANKRD44Q8N8A2 993 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 LINS1Q8NG48 757 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 DPF1Q92782 380 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 KAT2BQ92831 832 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 MAP4K1Q92918 833 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 ATP2A3Q93084 1043 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 RBM17Q96I25 401 aaKnown RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 ZNF347Q96SE7 839 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 HERC2P3Q9BVR0 1158 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 CLPBQ9H078 707 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 C9orf78Q9NZ63 289 aaPredicted RBP4.36□□□□□ -1.71
CD46-216ENST00000490278 PDP2Q9P2J9 529 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 PGAP2Q9UHJ9 254 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 WDR17Q8IZU2 1322 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 LMTK3Q96Q04 1460 aa4.36□□□□□ -1.71
CD46-216ENST00000490278 DSCR3O14972 297 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 TSPAN3O60637 253 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 RBMXL2O75526 392 aaKnown RBP4.35□□□□□ -1.71
CD46-216ENST00000490278 TUBB4AP04350 444 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 POLBP06746 335 aa4.35□□□□□ -1.71
CD46-216ENST00000490278 TNNT1P13805 278 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms