RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 PGM1P36871 562 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 BCAP31P51572 246 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 WASHC5Q12768 1159 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 SF3B4Q15427 424 aaKnown RBP eCLIP10.09□□□□□ -0.79
NOD1-208ENST00000489614 UPP1Q16831 310 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 DCAF6Q58WW2 860 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 NEK10Q6ZWH5 1172 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 ZBTB46Q86UZ6 589 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 ANKMY2Q8IV38 441 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 TTC39CQ8N584 583 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 BEST2Q8NFU1 509 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 GSDMBQ8TAX9 411 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 ZNF606Q8WXB4 792 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 RFFLQ8WZ73 363 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 THAP2Q9H0W7 228 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 MRPL46Q9H2W6 279 aaKnown RBP10.09□□□□□ -0.79
NOD1-208ENST00000489614 EHD1Q9H4M9 534 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 NPHS2Q9NP85 383 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 DENND4CQ5VZ89 1909 aa10.09□□□□□ -0.79
NOD1-208ENST00000489614 GOLGA8TH3BQL2 631 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ATMINO43313 823 aaPredicted RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 FGFR1P11362 822 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PABPC1P11940 636 aaKnown RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 RAP1GAPP47736 663 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 AQP4P55087 323 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ZNF423Q2M1K9 1284 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ARL13BQ3SXY8 428 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 HSP90AA5PQ58FG0 334 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 FAM47CQ5HY64 1035 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ZNF667Q5HYK9 610 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CLLU1OSQ5K130 101 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 OGFOD2Q6N063 350 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 C11orf63Q6NUN7 778 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 TOP6BLQ8N6T0 577 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 OR6Y1Q8NGX8 325 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 VPS50Q96JG6 964 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 MAGEB18Q96M61 343 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ADAM33Q9BZ11 813 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ZNF518BQ9C0D4 1074 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PAIP1Q9H074 479 aaKnown RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 SACM1LQ9NTJ5 587 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ZDHHC18Q9NUE0 388 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 APPL1Q9UKG1 709 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 GTF3C4Q9UKN8 822 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PCDHGA3Q9Y5H0 932 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 FAM47E-STBD1D6RA91 191 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 NDC80O14777 642 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 RIPK2O43353 540 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 B4GALT3O60512 393 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CYP11A1P05108 521 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ESRRAP11474 423 aaPredicted RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 GNA15P30679 374 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PNPLA4P41247 253 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CHN2P52757 468 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 ARHGAP17Q68EM7 881 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PLEKHA7Q6IQ23 1121 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 TMEM270Q6UE05 265 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 NLRP9Q7RTR0 991 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PEX26Q7Z412 305 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 VPS36Q86VN1 386 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 UNC93AQ86WB7 457 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 MCOLN2Q8IZK6 566 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CRYBG2Q8N1P7 616 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 C3orf58Q8NDZ4 430 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 RAB3IL1Q8TBN0 382 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 HES6Q96HZ4 224 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 MRPL45Q9BRJ2 306 aaKnown RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 ERP44Q9BS26 406 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PCDHGB4Q9UN71 923 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PCDHB4Q9Y5E5 795 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PCDHGB5Q9Y5G0 923 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 K7EPI3 171 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 M0QZQ0 153 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CSPG5O95196 566 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 H2AFZP0C0S5 128 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 MMP8P22894 467 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CRABP2P29373 138 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 YWHAEP62258 255 aaKnown RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 OVGP1Q12889 678 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 TRPC3Q13507 836 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 RFPL4BQ6ZWI9 263 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 H2AFVQ71UI9 128 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 DPH6Q7L8W6 267 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 CLNKQ7Z7G1 428 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 FAM20CQ8IXL6 584 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 GFM2Q969S9 779 aaKnown RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 PRR11Q96HE9 360 aaPredicted RBP10.08□□□□□ -0.8
NOD1-208ENST00000489614 ZFP42Q96MM3 310 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 SLITRK6Q9H5Y7 841 aa10.08□□□□□ -0.8
NOD1-208ENST00000489614 C15orf38-AP3S2A0A0A6YYH1 394 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 A0A0G2JND7 137 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 ANKRD34BA5PLL1 514 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 CCDC188H7C350 402 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 DDX3YO15523 660 aaKnown RBP10.07□□□□□ -0.8
NOD1-208ENST00000489614 WEE2P0C1S8 567 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 CDH3P22223 829 aa10.07□□□□□ -0.8
NOD1-208ENST00000489614 RPL9P32969 192 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms