RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ARHGEF4Q9NR80 690 aa9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 VPS45Q9NRW7 570 aa9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 BCCIPQ9P287 314 aaKnown RBP eCLIP9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 EBF1Q9UH73 591 aa9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 CHORDC1Q9UHD1 332 aaPredicted RBP9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 MYO18AQ92614 2054 aaKnown RBP9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 NUP205Q92621 2012 aa9.31□□□□□ -0.92
TNRC6B-208ENST00000489500 TBC1D3BA6NDS4 549 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 SLC30A4O14863 429 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 COCHO43405 550 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 TLR5O60602 858 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 EPN2O95208 641 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 KAT7O95251 611 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 VNN1O95497 513 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 CYP17A1P05093 508 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 FAM87AP0C7U9 286 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ZNF806P0C7X5 589 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ADORA2BP29275 332 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 GRIA2P42262 883 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 GCLMP48507 274 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ATXN1P54253 815 aaKnown RBP9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 DLG4P78352 724 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 DMWDQ09019 674 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 CETN1Q12798 172 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 SRSF5Q13243 272 aaKnown RBP9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ANO4Q32M45 955 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 C2orf27AQ580R0 203 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 SCARA3Q6AZY7 606 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 TTC30AQ86WT1 665 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 SMYD4Q8IYR2 804 aaPredicted RBP9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 SLC2A14Q8TDB8 520 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 GSDMAQ96QA5 445 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 KCNK16Q96T55 309 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 HNRNPABQ99729 332 aaKnown RBP9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 DUSP9Q99956 384 aaKnown RBP9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 CSNK1G1Q9HCP0 422 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 FAM49BQ9NUQ9 324 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 WDR35Q9P2L0 1181 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 DEC1Q9P2X7 70 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 ZNF510Q9Y2H8 683 aa9.3□□□□□ -0.92
TNRC6B-208ENST00000489500 CEP192Q8TEP8 1941 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 CFAP54Q96N23 3096 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 RNGTTO60942 597 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 CCDC130P13994 396 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 CD58P19256 250 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 ACO1P21399 889 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 MXI1P50539 228 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 COG7P83436 770 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FKBP3Q00688 224 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 INCA1Q0VD86 236 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 TCERG1LQ5VWI1 586 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 NXPE4Q6UWF7 544 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FUKQ8N0W3 1084 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FAM181AQ8N9Y4 354 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FBXL13Q8NEE6 735 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 SCAMP5Q8TAC9 235 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 RIN3Q8TB24 985 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 PLEKHO2Q8TD55 490 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 USP33Q8TEY7 942 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 SMARCE1Q969G3 411 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 HEXIM2Q96MH2 286 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 DCLK3Q9C098 648 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FBRSL1Q9HCM7 1045 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 PARD6AQ9NPB6 346 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 SPHK2Q9NRA0 654 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 IL37Q9NZH6 218 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 GMIPQ9P107 970 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 STRIP2Q9ULQ0 834 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 MMP17Q9ULZ9 603 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 SCML2Q9UQR0 700 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 U3KQE9 123 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 SDK1Q7Z5N4 2213 aa9.29□□□□□ -0.92
TNRC6B-208ENST00000489500 FAM92AA1XBS5 289 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 K7EQS6 105 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 PSMA7O14818 248 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 SLC16A3O15427 465 aaKnown RBP9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 HOXC11O43248 304 aaPredicted RBP9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CILPO75339 1184 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 LEFTY1O75610 366 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CAVIN2O95810 425 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CYBBP04839 570 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 IRF1P10914 325 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CHKAP35790 457 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 MPLP40238 635 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 OPRD1P41143 372 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 LIMK1P53667 647 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CACNA2D1P54289 1103 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CREB5Q02930 508 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 PDE4CQ08493 712 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 BNIP3Q12983 259 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CRY1Q16526 586 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 PLK5Q496M5 336 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 CYP27C1Q4G0S4 372 aa9.28□□□□□ -0.92
TNRC6B-208ENST00000489500 C10orf120Q5SQS8 335 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms