RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 NCKAP1Q9Y2A7 1128 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SDK1Q7Z5N4 2213 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 ATG2BQ96BY7 2078 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ATXN2Q99700 1313 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SLC30A4O14863 429 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 FYNP06241 537 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 MMEP08473 750 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 HLA-EP13747 358 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF18P17022 549 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 PRKCHP24723 683 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 CD70P32970 193 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 HOXD12P35452 270 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SCNN1AP37088 669 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 CSKP41240 450 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 PTGER3P43115 390 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 MAPK8P45983 427 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 KLK7P49862 253 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SGSHP51688 502 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ATXN1P54253 815 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 CDR2Q01850 454 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SULT2A1Q06520 285 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF33AQ06730 810 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SLC12A1Q13621 1099 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 UAP1L1Q3KQV9 507 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ARL13BQ3SXY8 428 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 TRIM61Q5EBN2 209 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 PITRM1Q5JRX3 1037 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 BRMS1LQ5PSV4 323 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 STPG1Q5TH74 334 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 NADSYN1Q6IA69 706 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 TCEAL6Q6IPX3 200 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 FAM124AQ86V42 546 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 WDTC1Q8N5D0 677 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 TCEAL3Q969E4 200 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SLC39A13Q96H72 371 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 GTPBP2Q9BX10 602 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 NAA15Q9BXJ9 866 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 MIR1-1HGQ9H1L0 117 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SLC6A17Q9H1V8 727 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 GANQ9H2C0 597 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 DLL3Q9NYJ7 618 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 LIMA1Q9UHB6 759 aaKnown RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 MBD1Q9UIS9 605 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-232ENST00000489053 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 VPS28Q9UK41 221 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 FANCMQ8IYD8 2048 aa9.43□□□□□ -0.9
HDAC6-232ENST00000489053 IGHV1OR15-9A0A0B4J2B8 117 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 A0A1B0GVM2 712 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TCAF2A6NFQ2 919 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 GOLGA6L19H0YKK7 550 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 GDF9O60383 454 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 PAGE1O75459 146 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 CLDN11O75508 207 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SERPINC1P01008 464 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 CALB1P05937 261 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SRPRAP08240 638 aaKnown RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SYPP08247 313 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 PDGFRAP16234 1089 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 FERP16591 822 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TGM1P22735 817 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ITPKAP23677 461 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SDC4P31431 198 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF165P49910 485 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TPMTP51580 245 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ECT2LQ008S8 904 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 DUOXA1Q1HG43 343 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SLC25A52Q3SY17 297 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ACCSLQ4AC99 568 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF776Q68DI1 518 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ADIPOR2Q86V24 386 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 XYLT1Q86Y38 959 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 CCAR2Q8N163 923 aaKnown RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 FRMD1Q8N878 549 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF366Q8N895 744 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF397Q8NF99 534 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TOE1Q96GM8 510 aaKnown RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 OMDQ99983 421 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SELENOOQ9BVL4 669 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 GPR174Q9BXC1 333 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 MKRN2Q9H000 416 aaKnown RBP9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TKTL2Q9H0I9 626 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 ADAM22Q9P0K1 906 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 HCN2Q9UL51 889 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 VANGL2Q9ULK5 521 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 SPTBN2O15020 2390 aa9.42□□□□□ -0.9
HDAC6-232ENST00000489053 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
HDAC6-232ENST00000489053 LAMA1P25391 3075 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms