RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 MNS1Q8NEH6 495 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.51■□□□□ 0.23
CLDN11-208ENST00000488989 IGSF8Q969P0 613 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 OTUB2Q96DC9 234 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 MYEOVQ96EZ4 313 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 FRMD8P1Q9BZ68 369 aaPredicted RBP16.51■□□□□ 0.23
CLDN11-208ENST00000488989 ZYG11BQ9C0D3 744 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 ETNK2Q9NVF9 386 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 TMEM248Q9NWD8 314 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 TBC1D14Q9P2M4 693 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 ZNF212Q9UDV6 495 aa16.51■□□□□ 0.23
CLDN11-208ENST00000488989 USP15Q9Y4E8 981 aaPredicted RBP16.51■□□□□ 0.23
CLDN11-208ENST00000488989 CCDC188H7C350 402 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 KRIT1O00522 736 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 DAPK3O43293 454 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 CHKAP35790 457 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 NR2C2P49116 596 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 SMAD4Q13485 552 aaKnown RBP16.5■□□□□ 0.23
CLDN11-208ENST00000488989 CCNG2Q16589 344 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 RABGAP1LQ5R372 815 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 TTC39BQ5VTQ0 682 aaPredicted RBP16.5■□□□□ 0.23
CLDN11-208ENST00000488989 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 DRICH1Q6PGQ1 229 aaPredicted RBP16.5■□□□□ 0.23
CLDN11-208ENST00000488989 BBS7Q8IWZ6 715 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 LGI2Q8N0V4 545 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
CLDN11-208ENST00000488989 E2F7Q96AV8 911 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 RSPRY1Q96DX4 576 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 PRICKLE1Q96MT3 831 aaPredicted RBP16.5■□□□□ 0.23
CLDN11-208ENST00000488989 LRRC3BQ96PB8 259 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 CARD6Q9BX69 1037 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 KLC2Q9H0B6 622 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 HOMER3Q9NSC5 361 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 DONSONQ9NYP3 566 aa16.5■□□□□ 0.23
CLDN11-208ENST00000488989 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 CTAGE15A4D2H0 777 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 GRXCR2A6NFK2 248 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 SLC9A3R1O14745 358 aaPredicted RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 MBTPS2O43462 519 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 CTAGE8P0CG41 777 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 LAMP2P13473 410 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 IRAK1P51617 712 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 NOMO1Q15155 1222 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 ALFQ53S48 1182 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 RWDD4Q6NW29 188 aaKnown RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 RFWD3Q6PCD5 774 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 TMCO3Q6UWJ1 677 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 CHST9Q7L1S5 443 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 ADAT2Q7Z6V5 191 aaKnown RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 CTAGE6Q86UF2 777 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 CTAGE4Q8IX94 777 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 LZTR1Q8N653 840 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 BPIFB1Q8TDL5 484 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 RPRD1AQ96P16 312 aaPredicted RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 AP1M1Q9BXS5 423 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 MPP6Q9NZW5 540 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 NYNRINQ9P2P1 1898 aaKnown RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 EPS15L1Q9UBC2 864 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 R3HDM2Q9Y2K5 976 aaKnown RBP16.49■□□□□ 0.23
CLDN11-208ENST00000488989 MFHAS1Q9Y4C4 1052 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 RAD54BQ9Y620 910 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 SHROOM3Q8TF72 1996 aa16.49■□□□□ 0.23
CLDN11-208ENST00000488989 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 PHF2O75151 1096 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 CNTN5O94779 1100 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 PECAM1P16284 738 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 SERPINB6P35237 376 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 VIPR2P41587 438 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 MAPKAPK2P49137 400 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 CDH4P55283 916 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 DYNLT1P63172 113 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 OTUD4Q01804 1114 aaKnown RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 SLC10A2Q12908 348 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 CCDC85BQ15834 202 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 MPP7Q5T2T1 576 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 AFMIDQ63HM1 303 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 SLC35B2Q8TB61 432 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 ACTL9Q8TC94 416 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 P3H4Q92791 437 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 OLFM3Q96PB7 478 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 ZFP14Q9HCL3 533 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
CLDN11-208ENST00000488989 DTLQ9NZJ0 730 aa16.48■□□□□ 0.23
CLDN11-208ENST00000488989 A0A1B0GVM2 712 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 TCAF2A6NFQ2 919 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 HEPACAM2A8MVW5 462 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 RIOK3O14730 519 aaKnown RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 LIASO43766 372 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 MFSD11O43934 449 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 CLDN11O75508 207 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 SLU7O95391 586 aaKnown RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 KCNA5P22460 613 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 GBP2P32456 591 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-208ENST00000488989 FNTAP49354 379 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 SGSHP51688 502 aa16.47■□□□□ 0.23
CLDN11-208ENST00000488989 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms