RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GPS1Q13098 491 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 HLFQ16534 295 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 KIF19Q2TAC6 998 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 TDRD12Q587J7 1177 aaKnown RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 ADAM5Q6NVV9 412 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 TLDC1Q6P9B6 456 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF449Q6P9G9 518 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 KIAA0319LQ8IZA0 1049 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 CLIP4Q8N3C7 705 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 SPEM1Q8N4L4 309 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 PAQR4Q8N4S7 273 aaPredicted RBP3.11□□□□□ -1.91
CCDC93-209ENST00000488908 IGSF21Q96ID5 467 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF347Q96SE7 839 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 LRRC27Q9C0I9 530 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 MAGEH1Q9H213 219 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 PRDM16Q9HAZ2 1276 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF287Q9HBT7 754 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 L1RE1Q9UN81 338 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 B3GNT3Q9Y2A9 372 aa3.11□□□□□ -1.91
CCDC93-209ENST00000488908 E2F8A0AVK6 867 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 MT-ND5P03915 603 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 F7P08709 466 aaPredicted RBP3.1□□□□□ -1.91
CCDC93-209ENST00000488908 TGM2P21980 687 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 PMPCAQ10713 525 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 SLC39A14Q15043 492 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 ALG10Q5BKT4 473 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 FSCBQ5H9T9 825 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 ALG10BQ5I7T1 473 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 ABLIM2Q6H8Q1 611 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 SESTD1Q86VW0 696 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 TAF15Q92804 592 aaKnown RBP eCLIP3.1□□□□□ -1.91
CCDC93-209ENST00000488908 KAT2AQ92830 837 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 SNX22Q96L94 193 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 HEYLQ9NQ87 328 aaPredicted RBP3.1□□□□□ -1.91
CCDC93-209ENST00000488908 TBC1D23Q9NUY8 699 aa3.1□□□□□ -1.91
CCDC93-209ENST00000488908 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 BMPR1BO00238 502 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 VWA5AO00534 786 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 PPP6R2O75170 966 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 CNTN5O94779 1100 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 LCKP06239 509 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ARP10275 920 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ALADP13716 330 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 GM2AP17900 193 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ATICP31939 592 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 GSTM5P46439 218 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 SELENOVP59797 346 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 PIN1Q13526 163 aaPredicted RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 PLCB4Q15147 1175 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ENTPD8Q5MY95 495 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 CCDC144NLQ6NUI1 221 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 MEX3BQ6ZN04 569 aaKnown RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 RNF44Q7L0R7 432 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 EPM2AIP1Q7L775 607 aaPredicted RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 FJX1Q86VR8 437 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 CAMK1DQ8IU85 385 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 TPH2Q8IWU9 490 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ENGASEQ8NFI3 743 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF419Q96HQ0 510 aaPredicted RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 MSLNLQ96KJ4 702 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 EIF3CQ99613 913 aaKnown RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 WDR77Q9BQA1 342 aaPredicted RBP3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ZBTB26Q9HCK0 441 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 SDF2L1Q9HCN8 221 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 PCDH12Q9NPG4 1184 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 TMOD4Q9NZQ9 345 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 IGSF9Q9P2J2 1179 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ZNF180Q9UJW8 692 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 COL4A3BPQ9Y5P4 624 aa3.09□□□□□ -1.91
CCDC93-209ENST00000488908 ANTXRLA6NF34 631 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 I6L893 689 aaPredicted RBP3.08□□□□□ -1.92
CCDC93-209ENST00000488908 LIASO43766 372 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 COQ9O75208 318 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 VEGFCP49767 419 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 CACNB3P54284 484 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 POLE2P56282 527 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 ACSM2AQ08AH3 577 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 CBFBQ13951 182 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 GALNT3Q14435 633 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 SRFBP1Q8NEF9 429 aaKnown RBP3.08□□□□□ -1.92
CCDC93-209ENST00000488908 OR14A16Q8NHC5 309 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 FAM216AQ8WUB2 273 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 APIPQ96GX9 242 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.08□□□□□ -1.92
CCDC93-209ENST00000488908 PNRC2Q9NPJ4 139 aaKnown RBP3.08□□□□□ -1.92
CCDC93-209ENST00000488908 RNF146Q9NTX7 359 aa3.08□□□□□ -1.92
CCDC93-209ENST00000488908 A0A1B0GVY2 172 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 MS4A18H0YCH9 400 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 ZSCAN9O15535 394 aaPredicted RBP3.07□□□□□ -1.92
CCDC93-209ENST00000488908 NEURL1O76050 574 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 MYF5P13349 255 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 ZNF12P17014 697 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 CHRNB2P17787 502 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 SLC37A1P57057 533 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 KRTAP10-3P60369 221 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 POLD3Q15054 466 aaPredicted RBP3.07□□□□□ -1.92
CCDC93-209ENST00000488908 CCDC6Q16204 474 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 FAXCQ5TGI0 409 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 PMS2CLQ68D20 193 aa3.07□□□□□ -1.92
CCDC93-209ENST00000488908 KRT28Q7Z3Y7 464 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms