RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 EIF2B4Q9UI10 523 aaKnown RBP11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 CEP83Q9Y592 693 aa11.71□□□□□ -0.53
NIPAL3-207ENST00000488155 ARID1BQ8NFD5 2236 aaPredicted RBP11.71□□□□□ -0.54
NIPAL3-207ENST00000488155 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 GTPBP10A4D1E9 387 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 LUC7L3O95232 432 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 ERBB2P04626 1255 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 SYPP08247 313 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 CEACAM1P13688 526 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 GNSP15586 552 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 CSRP1P21291 193 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 ACSL1P33121 698 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 CLCN1P35523 988 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 KRT9P35527 623 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 GGCXP38435 758 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 RNASE9P60153 205 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 RPS14P62263 151 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 CDK17Q00537 523 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 NNTQ13423 1086 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 RAPGEF1Q13905 1077 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 VWA3BQ502W6 1294 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 PITRM1Q5JRX3 1037 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 MPP7Q5T2T1 576 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 RABEPKQ7Z6M1 372 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 DHX40Q8IX18 779 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 APCDD1Q8J025 514 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 ATP6V0D2Q8N8Y2 350 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 GANCQ8TET4 914 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 RPL10LQ96L21 214 aaKnown RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 TUBGCP2Q9BSJ2 902 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 PDCL3Q9H2J4 239 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 NDST4Q9H3R1 872 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 SLC32A1Q9H598 525 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 C6orf106Q9H6K1 298 aaPredicted RBP11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 SYNCQ9H7C4 482 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 DDIT4Q9NX09 232 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 SUN2Q9UH99 717 aa11.7□□□□□ -0.54
NIPAL3-207ENST00000488155 A0A1B0GTW7 788 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 FAM47DPA6NHR8 397 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 METTL12A8MUP2 240 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 TTC34A8MYJ7 566 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 F5H5T6 163 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 SIN3BO75182 1162 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 IGLV3-25P01717 112 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 DNTTP04053 509 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 ST8SIA6P61647 398 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 FAM193AP78312 1265 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 KCNMA1Q12791 1236 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 GRIK2Q13002 908 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 NME3Q13232 169 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 KCNJ12Q14500 433 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 MEA1Q16626 185 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 PTPN20Q4JDL3 420 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 EFHC1Q5JVL4 640 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 MIIPQ5JXC2 388 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 TAF3Q5VWG9 929 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 DNASE2BQ8WZ79 361 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 TTC17Q96AE7 1141 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 MYO19Q96H55 970 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 BTN2A3PQ96KV6 586 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 CAMK1GQ96NX5 476 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 NOX5Q96PH1 765 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 TRIM62Q9BVG3 475 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 KIAA1522Q9P206 1035 aaPredicted RBP11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 SUSD2Q9UGT4 822 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 SLC12A6Q9UHW9 1150 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 SLCO3A1Q9UIG8 710 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 PCDHGC3Q9UN70 934 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 ERVW-1Q9UQF0 538 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 FHOD1Q9Y613 1164 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 SLCO1B1Q9Y6L6 691 aa11.69□□□□□ -0.54
NIPAL3-207ENST00000488155 KCNU1A8MYU2 1149 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 BCAT2O15382 392 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 KRT37O76014 449 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 FSBPO95073 299 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 MOCS3O95396 460 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 SEMA4FO95754 770 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 PDGFRAP16234 1089 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 STK19P49842 368 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 CENPCQ03188 943 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 SEMA3BQ13214 749 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 ST3GAL2Q16842 350 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 ZNF776Q68DI1 518 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 DPY19L2P1Q6NXN4 242 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 C11orf57Q6ZUT1 292 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 BEND5Q7L4P6 421 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 MMAAQ8IVH4 418 aaKnown RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 ZNF557Q8N988 423 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 MRGPRX3Q96LB0 322 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 SLC2A13Q96QE2 648 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 IRX2Q9BZI1 471 aaPredicted RBP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 BTBD1Q9H0C5 482 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 IL21RQ9HBE5 538 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 LMBRD1Q9NUN5 540 aa11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.68□□□□□ -0.54
NIPAL3-207ENST00000488155 TAB2Q9NYJ8 693 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms