RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 GCN1Q92616 2671 aaKnown RBP20.2■□□□□ 0.82
SMPDL3A-202ENST00000487215 A0A1W2PP55 124 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 ENC1O14682 589 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 MID1O15344 667 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 ACSL4O60488 711 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 GABBR2O75899 941 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 VDRP11473 427 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 CSKP41240 450 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 CST6Q15828 149 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 DCAF17Q5H9S7 520 aaPredicted RBP20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 NUGGCQ68CJ6 796 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 NADSYN1Q6IA69 706 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 UNC45BQ8IWX7 931 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 SMYD4Q8IYR2 804 aaPredicted RBP20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 UBR7Q8N806 425 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 FIBINQ8TAL6 211 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 PIP4K2CQ8TBX8 421 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 NXPE2Q96DL1 559 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 CNDP2Q96KP4 475 aaKnown RBP20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 NEUROG2Q9H2A3 272 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 COQ4Q9Y3A0 265 aa20.19■□□□□ 0.82
SMPDL3A-202ENST00000487215 C10orf142B7Z368 130 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 PIK3R2O00459 728 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 CETN3O15182 167 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 RNASEH1O60930 286 aaKnown RBP20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 RNASEH2AO75792 299 aaKnown RBP20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 LDOC1O95751 146 aaPredicted RBP20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 ASLP04424 464 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 ITGAVP06756 1048 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 RGS7P49802 495 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 TBX4P57082 545 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 YWHAEP62258 255 aaKnown RBP20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 DNAJC3Q13217 504 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 KCNJ12Q14500 433 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 C9orf64Q5T6V5 341 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 TCERG1LQ5VWI1 586 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 KRBA2Q6ZNG9 492 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 HJURPQ8NCD3 748 aaPredicted RBP20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 SAP25Q8TEE9 199 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 SKA1Q96BD8 255 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 MYEOVQ96EZ4 313 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 ADAMTS1Q9UHI8 967 aa20.18■□□□□ 0.82
SMPDL3A-202ENST00000487215 A0A1W2PR77 199 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 LRRC72A6NJI9 287 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 WNT9AO14904 365 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 RFPL3O75679 317 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 JUPP14923 745 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 ABCB4P21439 1286 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 CD38P28907 300 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 HNF1BP35680 557 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 RPS24P62847 133 aaKnown RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 SFSWAPQ12872 951 aaKnown RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 ARID5BQ14865 1188 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 PMF1Q6P1K2 205 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 LCLAT1Q6UWP7 414 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 MMAAQ8IVH4 418 aaKnown RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 OR2T34Q8NGX1 318 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 CLEC4CQ8WTT0 213 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 SLC35F5Q8WV83 523 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 IRGQQ8WZA9 623 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 TFAP2BQ92481 460 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 AZIN2Q96A70 460 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 UBL7Q96S82 380 aaPredicted RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 AASDHPPTQ9NRN7 309 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 FZD4Q9ULV1 537 aa20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 TP53BP1Q12888 1972 aaPredicted RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 GOLGA4Q13439 2230 aaKnown RBP20.17■□□□□ 0.82
SMPDL3A-202ENST00000487215 LTFP02788 710 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 ITPKBP27987 946 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 SLC8A1P32418 973 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 CTSOP43234 321 aaPredicted RBP20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 ACADVLP49748 655 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 LRMPQ12912 555 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 FSCBQ5H9T9 825 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 C6orf118Q5T5N4 469 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 MMS22LQ6ZRQ5 1243 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 CARNMT1Q8N4J0 409 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 EID2Q8N6I1 236 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 KDM1BQ8NB78 822 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 ADAM32Q8TC27 787 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 OMDQ99983 421 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 GDF3Q9NR23 364 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 KIAA1257Q9ULG3 409 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 ERVW-1Q9UQF0 538 aa20.16■□□□□ 0.82
SMPDL3A-202ENST00000487215 TARSL2A2RTX5 802 aaKnown RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 TYW5A2RUC4 315 aaKnown RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 TTC34A8MYJ7 566 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 YKT6O15498 198 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 TLX3O43711 291 aaPredicted RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 C1SP09871 688 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 CDK4P11802 303 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 EPHA8P29322 1005 aaPredicted RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 CCR5P51681 352 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 CDH18Q13634 790 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 PITRM1Q5JRX3 1037 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 AADATQ8N5Z0 425 aa20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 FCRL2Q96LA5 508 aaPredicted RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 DDX50Q9BQ39 737 aaKnown RBP20.15■□□□□ 0.82
SMPDL3A-202ENST00000487215 ZSWIM1Q9BR11 485 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms