RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SGSHP51688 502 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 CDH6P55285 790 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 HTR4Q13639 388 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 GRM2Q14416 872 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 DPYSL2Q16555 572 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 ADGRF1Q5T601 910 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 FBXL22Q6P050 247 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 AADACL2Q6P093 401 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 MFSD6LQ8IWD5 586 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 KATNAL2Q8IYT4 538 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 SLC44A3Q8N4M1 653 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 KCTD6Q8NC69 237 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 IGSF8Q969P0 613 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-229ENST00000486665 ZFYVE19Q96K21 471 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 C16orf45Q96MC5 204 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-229ENST00000486665 DDX56Q9NY93 547 aaKnown RBP13.2□□□□□ -0.3
HDAC6-229ENST00000486665 IGSF9Q9P2J2 1179 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 VANGL2Q9ULK5 521 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
HDAC6-229ENST00000486665 ESPNB1AK53 854 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 E9PAM4 449 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 CREB3O43889 395 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 LRIG2O94898 1065 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 KRT1P04264 644 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 PYGMP11217 842 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 IRAK1P51617 712 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 RWDD2BP57060 319 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 NRG1Q02297 640 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 ZNF211Q13398 564 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 DPYSL3Q14195 570 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 KRT81Q14533 505 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 LLGL1Q15334 1064 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 PPP6R3Q5H9R7 873 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 ZFYVE27Q5T4F4 411 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 MANEALQ5VSG8 457 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 TRIM68Q6AZZ1 485 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 MFSD7Q6UXD7 560 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 RCOR2Q8IZ40 523 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 ADGRG2Q8IZP9 1017 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 LGI2Q8N0V4 545 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 OSCP1Q8WVF1 389 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 TSC1Q92574 1164 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 PSMB7Q99436 277 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 DUS2Q9NX74 493 aaKnown RBP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 CWC15Q9P013 229 aaKnown RBP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.19□□□□□ -0.3
HDAC6-229ENST00000486665 R4GN57 208 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 CACNA1IQ9P0X4 2223 aa13.19□□□□□ -0.3
HDAC6-229ENST00000486665 LRRD1A4D1F6 860 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 DRGXA6NNA5 263 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 KCNK3O14649 394 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 CNTN5O94779 1100 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC6-229ENST00000486665 DCNP07585 359 aaKnown RBP13.18□□□□□ -0.3
HDAC6-229ENST00000486665 GLULP15104 373 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 ARSAP15289 507 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 GOT1P17174 413 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 CXCR5P32302 372 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 FCHO2Q0JRZ9 810 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 MTA1Q13330 715 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 PDK2Q15119 407 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 TAZQ16635 292 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 EML3Q32P44 896 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 C5orf22Q49AR2 442 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 TMEM25Q86YD3 366 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 CFAP52Q8N1V2 620 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 CPXM2Q8N436 756 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 KIAA1958Q8N8K9 716 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 EXD1Q8NHP7 514 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 UBE2Q2Q8WVN8 375 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 PRICKLE1Q96MT3 831 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-229ENST00000486665 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-229ENST00000486665 FAM83CQ9BQN1 747 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 TBC1D17Q9HA65 648 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 DLGAP2Q9P1A6 1054 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 WNT16Q9UBV4 365 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 NEU3Q9UQ49 428 aa13.18□□□□□ -0.3
HDAC6-229ENST00000486665 NUP210Q8TEM1 1887 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-229ENST00000486665 HELZP42694 1942 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 OTOGLQ3ZCN5 2332 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 IGLV3-10A0A075B6K4 115 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 F5H5T6 163 aa13.17□□□□□ -0.3
HDAC6-229ENST00000486665 EEF2KO00418 725 aaKnown RBP13.17□□□□□ -0.3
HDAC6-229ENST00000486665 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms