RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 USP15Q9Y4E8 981 aaPredicted RBP20.92■□□□□ 0.94
HPS3-206ENST00000486530 TRIM66O15016 1216 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 TADA2AO75478 443 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 HTR7P34969 479 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 FAAP100Q0VG06 881 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 SLC1A5Q15758 541 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 PLEKHG4Q58EX7 1191 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 STEAP4Q687X5 459 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 CYS1Q717R9 158 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 CCNJLQ8IV13 435 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 ABI1Q8IZP0 508 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 APBB2Q92870 758 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 GRAMD1AQ96CP6 724 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 STAMBPL1Q96FJ0 436 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 HAPLN3Q96S86 360 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 CEP41Q9BYV8 373 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 TMEM51Q9NW97 253 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 ABI2Q9NYB9 513 aaPredicted RBP20.92■□□□□ 0.94
HPS3-206ENST00000486530 SNX10Q9Y5X0 201 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 SDR42E2A6NKP2 422 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 PITPNM1O00562 1244 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 ENPP3O14638 875 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 KRT37O76014 449 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 GARSP41250 739 aaKnown RBP20.91■□□□□ 0.94
HPS3-206ENST00000486530 ZKSCAN8Q15776 578 aaPredicted RBP20.91■□□□□ 0.94
HPS3-206ENST00000486530 SEPT7Q16181 437 aaKnown RBP20.91■□□□□ 0.94
HPS3-206ENST00000486530 LGSNQ5TDP6 509 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 FAM43BQ6ZT52 329 aaPredicted RBP20.91■□□□□ 0.94
HPS3-206ENST00000486530 PID1Q7Z2X4 250 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 SCN4BQ8IWT1 228 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 DBF4BQ8NFT6 615 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 KDM4CQ9H3R0 1056 aa20.91■□□□□ 0.94
HPS3-206ENST00000486530 FAM159BA6NKW6 160 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 F5H423 210 aaPredicted RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 KCNK1O00180 336 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 FAM155BO75949 473 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 SUN1O94901 812 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 MNX1P50219 401 aaPredicted RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 VARS2Q5ST30 1063 aaKnown RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 LVRNQ6Q4G3 990 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 SPATA21Q7Z572 469 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 PPM1EQ8WY54 764 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 CCT6BQ92526 530 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 VAT1Q99536 393 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 NAT9Q9BTE0 207 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 ACTR5Q9H9F9 607 aaPredicted RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 TRHDEQ9UKU6 1024 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 NUP205Q92621 2012 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 CCT8L1PA6NM43 557 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 CXorf49A8MYA2 514 aaPredicted RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 PQBP1O60828 265 aaKnown RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 SNRPAP09012 282 aaKnown RBP20.9■□□□□ 0.94
HPS3-206ENST00000486530 CCR1P32246 355 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 SLC18A2Q05940 514 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 SCD5Q86SK9 330 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 LRRC8CQ8TDW0 803 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 APOPT1Q96IL0 206 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 C8orf48Q96LL4 319 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 PLCD4Q9BRC7 762 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 ADAM28Q9UKQ2 775 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 GRID1Q9ULK0 1009 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 PCDHB7Q9Y5E2 793 aa20.9■□□□□ 0.94
HPS3-206ENST00000486530 MAGEA11P43364 429 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 COG7P83436 770 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 ZNF33AQ06730 810 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 PPP2R5DQ14738 602 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 LACTB2Q53H82 288 aaPredicted RBP20.89■□□□□ 0.93
HPS3-206ENST00000486530 ITPRIPL1Q6GPH6 555 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 TCP10LQ8TDR4 215 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 MTBPQ96DY7 904 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 SERAC1Q96JX3 654 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 PITPNM3Q9BZ71 974 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 FBXO44Q9H4M3 255 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 SMYD2Q9NRG4 433 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 NEU3Q9UQ49 428 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 SCML2Q9UQR0 700 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 PCDHB5Q9Y5E4 795 aa20.89■□□□□ 0.93
HPS3-206ENST00000486530 WDR27A2RRH5 827 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ERI2A8K979 691 aaKnown RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 GOLGA8RI6L899 631 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 FGF10O15520 208 aaPredicted RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 LPXNO60711 386 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ALDH1A2O94788 518 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 FSBPO95073 299 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 ALADP13716 330 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 PGAM1P18669 254 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 HOXC13P31276 330 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 LIG3P49916 1009 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 TCTN1Q2MV58 587 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 CASC4Q6P4E1 433 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 SLC39A5Q6ZMH5 540 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 NUP93Q8N1F7 819 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 CASP10Q92851 521 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 SERPINB11Q96P15 392 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 KLF6Q99612 283 aaPredicted RBP20.88■□□□□ 0.93
HPS3-206ENST00000486530 CRISPLD2Q9H0B8 497 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 GBA3Q9H227 469 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 MOCS1Q9NZB8 636 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 TANC1Q9C0D5 1861 aa20.88■□□□□ 0.93
HPS3-206ENST00000486530 TTC3P53804 2025 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms