RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 IL31Q6EBC2 164 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 TCEAL6Q6IPX3 200 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 TRIM72Q6ZMU5 477 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 ADIPOR2Q86V24 386 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 FRMD1Q8N878 549 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 FIBINQ8TAL6 211 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 DDX1Q92499 740 aaKnown RBP13.33□□□□□ -0.28
CHMP3-208ENST00000486404 TCEAL3Q969E4 200 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 RPRD1AQ96P16 312 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-208ENST00000486404 BPIFA3Q9BQP9 254 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 RTKNQ9BST9 563 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 EDEM2Q9BV94 578 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 DLL3Q9NYJ7 618 aa13.33□□□□□ -0.28
CHMP3-208ENST00000486404 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
CHMP3-208ENST00000486404 NOCTQ9UK39 431 aaKnown RBP13.33□□□□□ -0.28
CHMP3-208ENST00000486404 IGHV1OR15-9A0A0B4J2B8 117 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 A0A1B0GVM2 712 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 TCAF2A6NFQ2 919 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ASLP04424 464 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ATP1A3P13637 1013 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 PTMSP20962 102 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 CSKP41240 450 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 NSFP46459 744 aaKnown RBP13.32□□□□□ -0.28
CHMP3-208ENST00000486404 GABRB2P47870 512 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 TPM4P67936 248 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ENPP2Q13822 863 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 NCAPHQ15003 741 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 SPDYCQ5MJ68 293 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 CIR1Q86X95 450 aaPredicted RBP13.32□□□□□ -0.28
CHMP3-208ENST00000486404 XYLT1Q86Y38 959 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 TMPRSS6Q8IU80 811 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF366Q8N895 744 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 SIPA1Q96FS4 1042 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 HSPA12BQ96MM6 686 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 FBRSQ9HAH7 460 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 ADAMTS9Q9P2N4 1935 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 CACNA1AO00555 2505 aa13.32□□□□□ -0.28
CHMP3-208ENST00000486404 DOCK4Q8N1I0 1966 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 MEI4A8MW99 385 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 SLC30A4O14863 429 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 GDF9O60383 454 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 CFIP05156 583 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 CD6P30203 668 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 PTGER3P43115 390 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF165P49910 485 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 FOXK2Q01167 660 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 CENPCQ03188 943 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 DEUP1Q05D60 604 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-208ENST00000486404 C2CD6Q53TS8 623 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 PITRM1Q5JRX3 1037 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 RABEPKQ7Z6M1 372 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 SYT12Q8IV01 421 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 DEFB119Q8N690 84 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 OR2T3Q8NH03 318 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 MYEOVQ96EZ4 313 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 C11orf70Q9BRQ4 267 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 MKRN2Q9H000 416 aaKnown RBP13.31□□□□□ -0.28
CHMP3-208ENST00000486404 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
CHMP3-208ENST00000486404 PIGVQ9NUD9 493 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 TMEM51Q9NW97 253 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 KIAA1522Q9P206 1035 aaPredicted RBP13.31□□□□□ -0.28
CHMP3-208ENST00000486404 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
CHMP3-208ENST00000486404 PAGE1O75459 146 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 F9P00740 461 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 CCDC172P0C7W6 258 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 OXTRP30559 389 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 HOXD12P35452 270 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 GGCXP38435 758 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 OXCT1P55809 520 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 FMO1Q01740 532 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 CAMK2GQ13555 558 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 AUHQ13825 339 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 PTPRNQ16849 979 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 PLEKHG6Q3KR16 790 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 SLC25A52Q3SY17 297 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 TRIM61Q5EBN2 209 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 BRMS1LQ5PSV4 323 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 SYCP2LQ5T4T6 812 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 OTUD1Q5VV17 481 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 ZNF776Q68DI1 518 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 LRSAM1Q6UWE0 723 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 KIAA0907Q7Z7F0 614 aaPredicted RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 DHX40Q8IX18 779 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
CHMP3-208ENST00000486404 TBCBQ99426 244 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 NPY6RQ99463 290 aa13.3□□□□□ -0.28
CHMP3-208ENST00000486404 PRMT1Q99873 361 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms