RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 GOLGA6L10A6NI86 522 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 ABLIM3O94929 683 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 PAPLNO95428 1278 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 IGLV3-25P01717 112 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 HNRNPA1P09651 372 aaKnown RBP eCLIP15.06■□□□□ 0
POLR2J3-204ENST00000486319 NUDT17P0C025 328 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 AMPD1P23109 780 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 HCAR3P49019 387 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 GDF10P55107 478 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 BRMS1LQ5PSV4 323 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 NCBP2-AS2Q69YL0 99 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 RTL10Q7L3V2 364 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 CCDC25Q86WR0 208 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 ZCCHC9Q8N567 271 aaKnown RBP15.06■□□□□ 0
POLR2J3-204ENST00000486319 FAM71DQ8N9W8 422 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 ATAD1Q8NBU5 361 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 SPATA17Q96L03 361 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 CEP295NLQ96MC4 621 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 SMOC2Q9H3U7 446 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 IL37Q9NZH6 218 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 SHOC2Q9UQ13 582 aa15.06■□□□□ 0
POLR2J3-204ENST00000486319 FAM92AA1XBS5 289 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 EEF2KO00418 725 aaKnown RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 PRRG1O14668 218 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 POLR3GO15318 223 aaPredicted RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 IRAK2O43187 625 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 CREB3O43889 395 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RNF40O75150 1001 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 ZNF189O75820 626 aaPredicted RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 HAPLN1P10915 354 aaPredicted RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 ALADP13716 330 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 HOXA9P31269 272 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RPL22P35268 128 aaKnown RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 RPL10AP62906 217 aaKnown RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 EIF4EBP2Q13542 120 aaPredicted RBP15.05■□□□□ -0
POLR2J3-204ENST00000486319 MGAT5BQ3V5L5 792 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 TPGS2Q68CL5 300 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 DENND2CQ68D51 928 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 C4orf22Q6V702 233 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 DENND5BQ6ZUT9 1274 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 SCD5Q86SK9 330 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 HOOK3Q86VS8 718 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RELL1Q8IUW5 271 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RNF34Q969K3 372 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 RTP4Q96DX8 246 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 MAGEB5Q9BZ81 275 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 TKTL2Q9H0I9 626 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 EPHX3Q9H6B9 360 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 CYP4F11Q9HBI6 524 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 ARHGEF4Q9NR80 690 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 NFS1Q9Y697 457 aa15.05■□□□□ -0
POLR2J3-204ENST00000486319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 HACD1B0YJ81 288 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 C2CD4DB7Z1M9 353 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 CCL16O15467 120 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 XYLBO75191 536 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 YWHAQP27348 245 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 CHKAP35790 457 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 GPR15P49685 360 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 PSEN1P49768 467 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 TPI1P60174 286 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 SEMA3BQ13214 749 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 DPYSQ14117 519 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 PAFAH1B3Q15102 231 aaKnown RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 SLC45A4Q5BKX6 768 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 CEP85LQ5SZL2 805 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 RNASEH2BQ5TBB1 312 aaKnown RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 RFX8Q6ZV50 586 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 PDZD4Q76G19 769 aaPredicted RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 OTOP3Q7RTS5 596 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 CROCCP2Q86T23 111 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 PPIL6Q8IXY8 311 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 TDRD5Q8NAT2 981 aaKnown RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 ZBTB9Q96C00 473 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 SERPINB11Q96P15 392 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 SEPT5Q99719 369 aaPredicted RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 EPAS1Q99814 870 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 OSBPL2Q9H1P3 480 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 SEMA4AQ9H3S1 761 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 C10orf88Q9H8K7 445 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 USP29Q9HBJ7 922 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 TMPRSS4Q9NRS4 437 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 ARHGEF38Q9NXL2 777 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 VPS18Q9P253 973 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 PAK5Q9P286 719 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 AFF4Q9UHB7 1163 aaKnown RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 MUTYHQ9UIF7 546 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 MAFFQ9ULX9 164 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
POLR2J3-204ENST00000486319 RAD54BQ9Y620 910 aa15.04■□□□□ -0
POLR2J3-204ENST00000486319 A0A1W2PQH9 124 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 KCNN4O15554 427 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 RIPK2O43353 540 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 DCXO43602 365 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 RBL1P28749 1068 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 CCR1P32246 355 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 GBE1Q04446 702 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 IFFO1Q0D2I5 559 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 PPP2R5DQ14738 602 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms