RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LILRB5O75023 590 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ADAM23O75077 832 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 LUC7L3O95232 432 aaKnown RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 GJB6O95452 261 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 DESP17661 470 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 GPD1P21695 349 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 HLA-FP30511 346 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 CNR2P34972 360 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 OXCT1P55809 520 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 CDH18Q13634 790 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 HGSNATQ68CP4 663 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 FBXL22Q6P050 247 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 SARM1Q6SZW1 724 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 LRRC31Q6UY01 552 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 CHST9Q7L1S5 443 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 STRADAQ7RTN6 431 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 BNIPLQ7Z465 357 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 KIAA0907Q7Z7F0 614 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 AHI1Q8N157 1196 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 CENPIQ92674 756 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 NKD2Q969F2 451 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 RPRD1AQ96P16 312 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 HAPLN3Q96S86 360 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 TRIM5Q9C035 493 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 FAM117AQ9C073 453 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 RBSNQ9H1K0 784 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ZDHHC4Q9NPG8 344 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ZNHIT6Q9NWK9 470 aaKnown RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
HMG20B-211ENST00000486028 EBF1Q9UH73 591 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ADAMTS1Q9UHI8 967 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 HCN2Q9UL51 889 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 PLA2G4CQ9UP65 541 aa12.86□□□□□ -0.35
HMG20B-211ENST00000486028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 AXIN1O15169 862 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 MYBL1P10243 752 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 HOXB2P14652 356 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 POLR2EP19388 210 aaKnown RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 WASP42768 502 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ZNF143P52747 638 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ZNF177Q13360 481 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 MAMLD1Q13495 774 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 CDO1Q16878 200 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 C15orf59Q2T9L4 293 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ARL13BQ3SXY8 428 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 TMEM215Q68D42 235 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 PLEKHA7Q6IQ23 1121 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 TMEM92Q6UXU6 159 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ADIPOR2Q86V24 386 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 FAM131BQ86XD5 332 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 FAM172AQ8WUF8 416 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 SORCS1Q8WY21 1168 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 LMLNQ96KR4 655 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 MCEEQ96PE7 176 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ACOX2Q99424 681 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 CNPY3Q9BT09 278 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 ISCUQ9H1K1 167 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 CACNA2D2Q9NY47 1150 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 THAP10Q9P2Z0 257 aaPredicted RBP12.85□□□□□ -0.35
HMG20B-211ENST00000486028 VANGL2Q9ULK5 521 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 STON1Q9Y6Q2 735 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 KIAA1549LQ6ZVL6 1849 aa12.85□□□□□ -0.35
HMG20B-211ENST00000486028 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 TCAF2A6NFQ2 919 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 HRO43593 1189 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 CLDN11O75508 207 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 MOCS3O95396 460 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 LMNAP02545 664 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 HOXC13P31276 330 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 CD70P32970 193 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 ADRA1BP35368 520 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 HDAC4P56524 1084 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 LMAN2Q12907 356 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 FSCBQ5H9T9 825 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 ANO7Q6IWH7 933 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 C14orf80Q86SX3 495 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 WFDC5Q8TCV5 224 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 GABRG3Q99928 467 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 MRPL47Q9HD33 250 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 ANLNQ9NQW6 1124 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 CNOT8Q9UFF9 292 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 RAB23Q9ULC3 237 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 SNX10Q9Y5X0 201 aa12.84□□□□□ -0.35
HMG20B-211ENST00000486028 RIF1Q5UIP0 2472 aaKnown RBP12.84□□□□□ -0.35
HMG20B-211ENST00000486028 WDR87Q6ZQQ6 2873 aa12.83□□□□□ -0.35
HMG20B-211ENST00000486028 VPS13AQ96RL7 3174 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms