RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ANXA2P07355 339 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 KITP10721 976 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 XRCC6P12956 609 aaKnown RBP eCLIP4.72□□□□□ -1.65
RTN4-213ENST00000485749 KRT5P13647 590 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 PTPN2P17706 415 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 SP100P23497 879 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 ACAT1P24752 427 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 TACR1P25103 407 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 TLX1P31314 330 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 CSTF2P33240 577 aaKnown RBP eCLIP4.72□□□□□ -1.65
RTN4-213ENST00000485749 PSMD7P51665 324 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ARFIP2P53365 341 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 MAP3K7CLP57077 242 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 KCNJ10P78508 379 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 HTRA4P83105 476 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 UBE3AQ05086 875 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 MAP3K12Q12852 859 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 STK4Q13043 487 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 RPA4Q13156 261 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 CUL1Q13616 776 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 EFTUD2Q15029 972 aaKnown RBP eCLIP4.72□□□□□ -1.651e-13■■□□□ 13.7
RTN4-213ENST00000485749 IQCB1Q15051 598 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 STILQ15468 1287 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 RBM20Q5T481 1227 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 TANGO2Q6ICL3 276 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ZC3H14Q6PJT7 736 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 SLC22A25Q6T423 547 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 KLHL24Q6TFL4 600 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ATF7IPQ6VMQ6 1270 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 MEX3BQ6ZN04 569 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 CXXC5Q7LFL8 322 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 MOGAT3Q86VF5 341 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 RFX6Q8HWS3 928 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 CDH26Q8IXH8 852 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 C17orf53Q8N3J3 647 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 TXLNBQ8N3L3 684 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 NIPA2Q8N8Q9 360 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ZBTB8BQ8NAP8 495 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 SPATA20Q8TB22 786 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 BRIX1Q8TDN6 353 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 IGDCC4Q8TDY8 1250 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 SH3RF3Q8TEJ3 882 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 TNPO1Q92973 898 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 CUL5Q93034 780 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ZBTB9Q96C00 473 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 IQCDQ96DY2 449 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 TSPAN17Q96FV3 270 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 SH3GL2Q99962 352 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 HEPHQ9BQS7 1158 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 FUT8Q9BYC5 575 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 B3GNT4Q9C0J1 378 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.72□□□□□ -1.65
RTN4-213ENST00000485749 OR10A5Q9H207 317 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ABCG8Q9H221 673 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 SERHL2Q9H4I8 314 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 SMARCAD1Q9H4L7 1026 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 STN1Q9H668 368 aaKnown RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 HAUS4Q9H6D7 363 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 EPS8L2Q9H6S3 715 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 DNAJC18Q9H819 358 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 MMRN2Q9H8L6 949 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 OBP2BQ9NPH6 170 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 GPR108Q9NPR9 543 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 PFDN4Q9NQP4 134 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 NECTIN3Q9NQS3 549 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 TAB2Q9NYJ8 693 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 DTLQ9NZJ0 730 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 COL20A1Q9P218 1284 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 KLHL14Q9P2G3 628 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 CPNE7Q9UBL6 633 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 MORF4L1Q9UBU8 362 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ZMYND8Q9ULU4 1186 aaPredicted RBP4.72□□□□□ -1.65
RTN4-213ENST00000485749 GMEB1Q9Y692 573 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 UACAQ9BZF9 1416 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 ZBED9Q6R2W3 1325 aa4.72□□□□□ -1.65
RTN4-213ENST00000485749 TRIM43BA6NCK2 446 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ZSCAN5CA6NGD5 496 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 ACOD1A6NK06 481 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ZNF839A8K0R7 811 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 STX16-NPEPL1H3BU86 382 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TULP2O00295 520 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 E2F3O00716 465 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 NVLO15381 856 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 TTI1O43156 1089 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 EFEMP2O95967 443 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ZFYP08048 801 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 HNRNPLP14866 589 aaKnown RBP eCLIP4.71□□□□□ -1.66
RTN4-213ENST00000485749 MALP21145 153 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 CTSSP25774 331 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 MSNP26038 577 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 CCT6AP40227 531 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 MLH1P40692 756 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ACAA2P42765 397 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC6A9P48067 706 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 MAPKAPK2P49137 400 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 CCT8P50990 548 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ZNF41P51814 821 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 RAD23AP54725 363 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 PLTPP55058 493 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms