RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 LUC7L3O95232 432 aaKnown RBP20.54■□□□□ 0.88
COL6A2-208ENST00000485591 RARAP10276 462 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CD72P21854 359 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 SSR1P43307 286 aaKnown RBP20.54■□□□□ 0.88
COL6A2-208ENST00000485591 DGKGP49619 791 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 GALK1P51570 392 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 TAS2R40P59535 323 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 PON2Q15165 354 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CA9Q16790 459 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 SMTNL2Q2TAL5 461 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 PREPLQ4J6C6 727 aaPredicted RBP20.54■□□□□ 0.88
COL6A2-208ENST00000485591 TXNRD3NBQ6F5E7 133 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 GRAMD4Q6IC98 578 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CHST9Q7L1S5 443 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CIR1Q86X95 450 aaPredicted RBP20.54■□□□□ 0.88
COL6A2-208ENST00000485591 MFN1Q8IWA4 741 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CCAR2Q8N163 923 aaKnown RBP20.54■□□□□ 0.88
COL6A2-208ENST00000485591 EPAS1Q99814 870 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 ZYG11BQ9C0D3 744 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 LTB4R2Q9NPC1 389 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 CLEC4EQ9ULY5 219 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 NEU3Q9UQ49 428 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 SLC27A6Q9Y2P4 619 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 PPP2R2CQ9Y2T4 447 aa20.54■□□□□ 0.88
COL6A2-208ENST00000485591 MACROD2A1Z1Q3 448 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 SRGAP2O75044 1071 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 CLDN11O75508 207 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 KRT7P08729 469 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 CISD3P0C7P0 127 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 COMTP21964 271 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 HOXC13P31276 330 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 HTR7P34969 479 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 ZNF135P52742 658 aaPredicted RBP20.53■□□□□ 0.88
COL6A2-208ENST00000485591 NAP1L1P55209 391 aaKnown RBP20.53■□□□□ 0.88
COL6A2-208ENST00000485591 CDH4P55283 916 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 CDH18Q13634 790 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 DPYSL2Q16555 572 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 KCNT1Q5JUK3 1230 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 POLNQ7Z5Q5 900 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 ZNF687Q8N1G0 1237 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 RNF10Q8N5U6 811 aaKnown RBP20.53■□□□□ 0.88
COL6A2-208ENST00000485591 FIBINQ8TAL6 211 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 TBC1D31Q96DN5 1066 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 NELL2Q99435 816 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 MFSD1Q9H3U5 465 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 EPHX3Q9H6B9 360 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 FBRSL1Q9HCM7 1045 aaKnown RBP20.53■□□□□ 0.88
COL6A2-208ENST00000485591 ARHGEF4Q9NR80 690 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL6A2-208ENST00000485591 ALG6Q9Y672 507 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 F5P12259 2224 aa20.53■□□□□ 0.88
COL6A2-208ENST00000485591 SPOPO43791 374 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 CNTN5O94779 1100 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 DRD1P21728 446 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 TARSP26639 723 aaKnown RBP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 KDSRQ06136 332 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 GRSF1Q12849 480 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 ALFQ53S48 1182 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 LRRC38Q5VT99 294 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 FSTL4Q6MZW2 842 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 DAAM2Q86T65 1068 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 CCDC117Q8IWD4 279 aaPredicted RBP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 CARNMT1Q8N4J0 409 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 TERB1Q8NA31 727 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 WFDC5Q8TCV5 224 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 HSPH1Q92598 858 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 KCTD15Q96SI1 283 aaPredicted RBP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 OSBPL6Q9BZF3 934 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 FOXQ1Q9C009 403 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 GOLPH3Q9H4A6 298 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 RETREG1Q9H6L5 497 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 MPP6Q9NZW5 540 aa20.52■□□□□ 0.88
COL6A2-208ENST00000485591 NDRG2Q9UN36 371 aaKnown RBP20.52■□□□□ 0.88
COL6A2-208ENST00000485591 CHD5Q8TDI0 1954 aa20.52■□□□□ 0.87
COL6A2-208ENST00000485591 A0A0A0MRY4 1105 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 GRID2IPA4D2P6 1211 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 H0Y626 953 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 TRIM24O15164 1050 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 CREB3O43889 395 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 KAT7O95251 611 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 MOCS3O95396 460 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 PDGFBP01127 241 aaPredicted RBP20.51■□□□□ 0.87
COL6A2-208ENST00000485591 APODP05090 189 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 HLA-FP30511 346 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 GJC1P36383 396 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 GRIA2P42262 883 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 TPI1P60174 286 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 MESP2Q0VG99 397 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 UBXN2BQ14CS0 331 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 CWF19L1Q69YN2 538 aaKnown RBP20.51■□□□□ 0.87
COL6A2-208ENST00000485591 ASTLQ6HA08 431 aaPredicted RBP20.51■□□□□ 0.87
COL6A2-208ENST00000485591 RHOT1Q8IXI2 618 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 LRRC57Q8N9N7 239 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 PJA1Q8NG27 643 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 FAM71BQ8TC56 605 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 ZNF212Q9UDV6 495 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 HYOU1Q9Y4L1 999 aa20.51■□□□□ 0.87
COL6A2-208ENST00000485591 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.5■□□□□ 0.87
COL6A2-208ENST00000485591 EEF2KO00418 725 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms