RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 SLC8A2Q9UPR5 921 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 SCINQ9Y6U3 715 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 IGLV3-10A0A075B6K4 115 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ANTXRLA6NF34 631 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 AKR1B15C9JRZ8 316 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 LILRB5O75023 590 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 NTSR1P30989 418 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ADRA1BP35368 520 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 TIE1P35590 1138 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 EIF4A3P38919 411 aaKnown RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 DGKEP52429 567 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 OXCT1P55809 520 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 SCAPQ12770 1279 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 SLC12A1Q13621 1099 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 CRY1Q16526 586 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 SLC18A3Q16572 532 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ARL13BQ3SXY8 428 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 SH3PXD2AQ5TCZ1 1133 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 TMEM215Q68D42 235 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ZC3H14Q6PJT7 736 aaKnown RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 CHST9Q7L1S5 443 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ADIPOR2Q86V24 386 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 FAM131BQ86XD5 332 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 TXNDC5Q8NBS9 432 aaKnown RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 WFDC5Q8TCV5 224 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 FAM172AQ8WUF8 416 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 GABRG3Q99928 467 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 RETREG1Q9H6L5 497 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 ABCB8Q9NUT2 735 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 THAP10Q9P2Z0 257 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 CNOT8Q9UFF9 292 aaKnown RBP18.36■□□□□ 0.53
SREBF1-213ENST00000485080 GGA2Q9UJY4 613 aa18.36■□□□□ 0.53
SREBF1-213ENST00000485080 EP300Q09472 2414 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 OTOGLQ3ZCN5 2332 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 SGK1O00141 431 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CLDN11O75508 207 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 KLF8O95600 359 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 APBB3O95704 486 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 KCNA4P22459 653 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 AIF1P55008 147 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 ADKP55263 362 aaKnown RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CDH18Q13634 790 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 EGFLAMQ63HQ2 1017 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 TSSK4Q6SA08 328 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 C14orf80Q86SX3 495 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CFAP52Q8N1V2 620 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 IGSF8Q969P0 613 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 TTC17Q96AE7 1141 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 ZNF653Q96CK0 615 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 RPRD1AQ96P16 312 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 KIAA1522Q9P206 1035 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 STIM2Q9P246 746 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 PPARGC1AQ9UBK2 798 aaKnown RBP18.35■□□□□ 0.53
SREBF1-213ENST00000485080 VANGL2Q9ULK5 521 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 FAM186AA6NE01 2351 aa18.35■□□□□ 0.53
SREBF1-213ENST00000485080 CCP110O43303 1012 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CYP1A2P05177 515 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 DESP17661 470 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CD70P32970 193 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CNR2P34972 360 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 PLK1P53350 603 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CDH4P55283 916 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 OGDHQ02218 1023 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 LMAN2Q12907 356 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CDO1Q16878 200 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CCDC122Q5T0U0 273 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 TMEM92Q6UXU6 159 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 LRRC31Q6UY01 552 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 WDR5BQ86VZ2 330 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 LONP2Q86WA8 852 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 RASSF3Q86WH2 238 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CCDC33Q8N5R6 958 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 TC2NQ8N9U0 490 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 NCAPGQ9BPX3 1015 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 SIK2Q9H0K1 926 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 TBC1D30Q9Y2I9 924 aa18.34■□□□□ 0.53
SREBF1-213ENST00000485080 DOCK4Q8N1I0 1966 aa18.33■□□□□ 0.53
SREBF1-213ENST00000485080 PTPRZ1P23471 2315 aaPredicted RBP18.33■□□□□ 0.53
SREBF1-213ENST00000485080 FRYLO94915 3013 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 H0Y626 953 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 ATMINO43313 823 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-213ENST00000485080 C7P10643 843 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 ACAP1Q15027 740 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 RAB6CQ53S08 254 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 FSCBQ5H9T9 825 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 MANEALQ5VSG8 457 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 SDE2Q6IQ49 451 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 CXorf57Q6NSI4 855 aaKnown RBP18.33■□□□□ 0.52
SREBF1-213ENST00000485080 DNAAF5Q86Y56 855 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 CHPFQ8IZ52 775 aa18.33■□□□□ 0.52
SREBF1-213ENST00000485080 CARNMT1Q8N4J0 409 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms