RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 INTS6Q9UL03 887 aaKnown RBP29.39■■■□□ 2.3
HLA-C-207ENST00000484378 PCDHGC3Q9UN70 934 aa29.39■■■□□ 2.3
HLA-C-207ENST00000484378 H0Y626 953 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 TACR2P21452 398 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 CDK17Q00537 523 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 TTC31Q49AM3 519 aaPredicted RBP29.38■■■□□ 2.29
HLA-C-207ENST00000484378 FSCBQ5H9T9 825 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 ZNF776Q68DI1 518 aaPredicted RBP29.38■■■□□ 2.29
HLA-C-207ENST00000484378 MMS22LQ6ZRQ5 1243 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 WDTC1Q8N5D0 677 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 ATP6V0D2Q8N8Y2 350 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 SLC12A6Q9UHW9 1150 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 EIF2B4Q9UI10 523 aaKnown RBP29.38■■■□□ 2.29
HLA-C-207ENST00000484378 DACH1Q9UI36 760 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 USP24Q9UPU5 2620 aa29.38■■■□□ 2.29
HLA-C-207ENST00000484378 SYNJ2BP-COX16A0A087WUM0 186 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 F5H5T6 163 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 BCAT2O15382 392 aaPredicted RBP29.37■■■□□ 2.29
HLA-C-207ENST00000484378 HSF2BPO75031 334 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 MOCS3O95396 460 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 GLI1P08151 1106 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 PRKCSHP14314 528 aaPredicted RBP29.37■■■□□ 2.29
HLA-C-207ENST00000484378 ACSL1P33121 698 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 PITRM1Q5JRX3 1037 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 EFHC1Q5JVL4 640 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 C1orf131Q8NDD1 294 aaKnown RBP29.37■■■□□ 2.29
HLA-C-207ENST00000484378 MYO19Q96H55 970 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 SLC2A13Q96QE2 648 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 MTG2Q9H4K7 406 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.37■■■□□ 2.29
HLA-C-207ENST00000484378 ASNSD1Q9NWL6 643 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 DDIT4Q9NX09 232 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 COX16Q9P0S2 106 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 CEP83Q9Y592 693 aa29.37■■■□□ 2.29
HLA-C-207ENST00000484378 SPAARA0A1B0GVQ0 90 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 C7P10643 843 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 KRT9P35527 623 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 SIM1P81133 766 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-207ENST00000484378 HSP90AA4PQ58FG1 418 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 SMYD5Q6GMV2 418 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 DEFB106AQ8N104 65 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 RNF34Q969K3 372 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 BTBD1Q9H0C5 482 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 NUP62CLQ9H1M0 184 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 NDST4Q9H3R1 872 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 C6orf106Q9H6K1 298 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-207ENST00000484378 SYNCQ9H7C4 482 aa29.36■■■□□ 2.29
HLA-C-207ENST00000484378 KIAA1522Q9P206 1035 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-207ENST00000484378 KCNU1A8MYU2 1149 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 GRAP2O75791 330 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 SEMA4FO95754 770 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 PNMA6AP0CW24 399 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-207ENST00000484378 SLC2A3P11169 496 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 CD59P13987 128 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 ABCB4P21439 1286 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 SLC14A1Q13336 389 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 HNRNPA1L2Q32P51 320 aaKnown RBP29.35■■■□□ 2.29
HLA-C-207ENST00000484378 VWA3BQ502W6 1294 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 OR6B2Q6IFH4 312 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 C11orf57Q6ZUT1 292 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-207ENST00000484378 FAM183BPQ6ZVS7 135 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 SLC47A2Q86VL8 602 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 MRGPRX3Q96LB0 322 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 TUBGCP2Q9BSJ2 902 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 RSPH9Q9H1X1 276 aaPredicted RBP29.35■■■□□ 2.29
HLA-C-207ENST00000484378 NUMA1Q14980 2115 aa29.35■■■□□ 2.29
HLA-C-207ENST00000484378 FOXN3O00409 490 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-207ENST00000484378 GJB3O75712 270 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 SPINK2P20155 84 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 ERCC5P28715 1186 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-207ENST00000484378 CCR1P32246 355 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 SNX16P57768 344 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 EIF4EBP2Q13542 120 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-207ENST00000484378 RNF219Q5W0B1 726 aaPredicted RBP29.34■■■□□ 2.29
HLA-C-207ENST00000484378 DHX40Q8IX18 779 aaKnown RBP29.34■■■□□ 2.29
HLA-C-207ENST00000484378 KDM1BQ8NB78 822 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 ERVW-1Q9UQF0 538 aa29.34■■■□□ 2.29
HLA-C-207ENST00000484378 PES1O00541 588 aaKnown RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 RNASEH1O60930 286 aaKnown RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 SIN3BO75182 1162 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 ERBB2P04626 1255 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 SRPRAP08240 638 aaKnown RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 CLCN1P35523 988 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 CTSOP43234 321 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 MIIPQ5JXC2 388 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 TTC39BQ5VTQ0 682 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 OLFML1Q6UWY5 402 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 CIR1Q86X95 450 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 GANCQ8TET4 914 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 WASF3Q9UPY6 502 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 ZBTB32Q9Y2Y4 487 aaPredicted RBP29.33■■■□□ 2.29
HLA-C-207ENST00000484378 PCNX2A6NKB5 2137 aa29.33■■■□□ 2.29
HLA-C-207ENST00000484378 TOP3BO95985 862 aaKnown RBP29.32■■■□□ 2.28
HLA-C-207ENST00000484378 ECT2LQ008S8 904 aa29.32■■■□□ 2.28
HLA-C-207ENST00000484378 RAPGEF1Q13905 1077 aa29.32■■■□□ 2.28
HLA-C-207ENST00000484378 PTPN20Q4JDL3 420 aa29.32■■■□□ 2.28
HLA-C-207ENST00000484378 RABGAP1LQ5R372 815 aa29.32■■■□□ 2.28
HLA-C-207ENST00000484378 FAM71AQ8IYT1 594 aa29.32■■■□□ 2.28
HLA-C-207ENST00000484378 PRMT1Q99873 361 aaKnown RBP29.32■■■□□ 2.28
HLA-C-207ENST00000484378 PABPC3Q9H361 631 aaKnown RBP29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms