RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 SIM1P81133 766 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 CDK17Q00537 523 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 GRIK2Q13002 908 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 CDH18Q13634 790 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 HNRNPDQ14103 355 aaKnown RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 MAN2A1Q16706 1144 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 FSCBQ5H9T9 825 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 PITRM1Q5JRX3 1037 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 EFHC1Q5JVL4 640 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 RAP1GAP2Q684P5 730 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 ZNF776Q68DI1 518 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 MMS22LQ6ZRQ5 1243 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 CHSY1Q86X52 802 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 FAM114A1Q8IWE2 563 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 DEFB106AQ8N104 65 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 KDM1BQ8NB78 822 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 MYO19Q96H55 970 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 MRGPRX3Q96LB0 322 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 SLC2A13Q96QE2 648 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 CPXM1Q96SM3 734 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 BTBD1Q9H0C5 482 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 CLSTN2Q9H4D0 955 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 MTG2Q9H4K7 406 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 C6orf106Q9H6K1 298 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 SGK2Q9HBY8 427 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 SIX2Q9NPC8 291 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 ASNSD1Q9NWL6 643 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 KIAA1522Q9P206 1035 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 ERVW-1Q9UQF0 538 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 SPAARA0A1B0GVQ0 90 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 TARSL2A2RTX5 802 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 PCNX2A6NKB5 2137 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 KCNU1A8MYU2 1149 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 F5H5T6 163 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SH3BP5O60239 455 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 RNASEH1O60930 286 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 HSF2BPO75031 334 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SIN3BO75182 1162 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SEMA4FO95754 770 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SRPRAP08240 638 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 SLC2A3P11169 496 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SPINK2P20155 84 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 ABCB4P21439 1286 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 CCR1P32246 355 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 RDXP35241 583 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 CLCN1P35523 988 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 KRT9P35527 623 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SNX16P57768 344 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 FAM193AP78312 1265 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 ECT2LQ008S8 904 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 HNRNPA1L2Q32P51 320 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 TTC31Q49AM3 519 aaPredicted RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 VWA3BQ502W6 1294 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 OR6B2Q6IFH4 312 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 IL27RAQ6UWB1 636 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 C11orf57Q6ZUT1 292 aaPredicted RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 PASD1Q8IV76 773 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 C1orf216Q8TAB5 229 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 SNX19Q92543 992 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 RNF34Q969K3 372 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 NOX5Q96PH1 765 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 PRMT1Q99873 361 aaKnown RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 SCNM1Q9BWG6 230 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 RSPH9Q9H1X1 276 aaPredicted RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 NDST4Q9H3R1 872 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 GAREM1Q9H706 876 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 FAM204AQ9H8W3 233 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 AJAP1Q9UKB5 411 aaPredicted RBP9.75□□□□□ -0.85
NUP50-215ENST00000484186 SCML1Q9UN30 329 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 NCKAP1Q9Y2A7 1128 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
NUP50-215ENST00000484186 MUC22E2RYF6 1773 aaPredicted RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 SYNJ2BP-COX16A0A087WUM0 186 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 TTC34A8MYJ7 566 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 GRAP2O75791 330 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 FSBPO95073 299 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 TRIM16O95361 564 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 CER1O95813 267 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 ERBB2P04626 1255 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 PROS1P07225 676 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 ZNF883P0CG24 379 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 PRKCSHP14314 528 aaPredicted RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 MATKP42679 507 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 CSNK1EP49674 416 aaKnown RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 BPIFB4P59827 614 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 BNC1Q01954 994 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 SLC6A3Q01959 620 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 SFSWAPQ12872 951 aaKnown RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 MTA1Q13330 715 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 SLC12A1Q13621 1099 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 TRIP6Q15654 476 aaKnown RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 MIIPQ5JXC2 388 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 RABGAP1LQ5R372 815 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 C9orf64Q5T6V5 341 aa9.74□□□□□ -0.85
NUP50-215ENST00000484186 RNF219Q5W0B1 726 aaPredicted RBP9.74□□□□□ -0.85
NUP50-215ENST00000484186 DPY19L2P1Q6NXN4 242 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms