RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FGFBP2Q9BYJ0 223 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 PANK2Q9BZ23 570 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 NACA2Q9H009 215 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 RNF38Q9H0F5 515 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TNMDQ9H2S6 317 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 FBRSQ9HAH7 460 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CFAP97Q9P2B7 532 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 SH3BP1Q9Y3L3 701 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 MORC2Q9Y6X9 1032 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TSC2P49815 1807 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 ATP8B3O60423 1300 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 PTPRJQ12913 1337 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CNOT1A5YKK6 2376 aaKnown RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 MYH11P35749 1972 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 TBC1D3BA6NDS4 549 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SGK1O00141 431 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 EIF3DO15371 548 aaKnown RBP eCLIP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 AP5Z1O43299 807 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CFIP05156 583 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ENGP17813 658 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 PTPN1P18031 435 aaKnown RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SPINK2P20155 84 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 YWHAQP27348 245 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ATICP31939 592 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 KIR2DL1P43626 348 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SLC6A11P48066 632 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SNRPFP62306 86 aaKnown RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ASIC1P78348 528 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 KDSRQ06136 332 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CUL4AQ13619 759 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SLBPQ14493 270 aaKnown RBP eCLIP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 PSMD6Q15008 389 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SLC39A14Q15043 492 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SNRNP35Q16560 246 aaKnown RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 DUOXA1Q1HG43 343 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 GAB4Q2WGN9 574 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 LY6G5CQ5SRR4 150 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 HECTD3Q5T447 861 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 EMC10Q5UCC4 262 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SLC23A3Q6PIS1 610 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 RHBDF2Q6PJF5 856 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SLC36A4Q6YBV0 504 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ARMCX6Q7L4S7 300 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 PDILTQ8N807 584 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 B3GALNT2Q8NCR0 500 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CEP76Q8TAP6 659 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 OVCA2Q8WZ82 227 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 FBXO32Q969P5 355 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SYAP1Q96A49 352 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CCDC127Q96BQ5 260 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 TNIP3Q96KP6 325 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CGRRF1Q99675 332 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SCNM1Q9BWG6 230 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF518BQ9C0D4 1074 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 CUEDC2Q9H467 287 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 DEC1Q9P2X7 70 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 MKL2Q9ULH7 1088 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.423e-6■■■■□ 21.1
CSDE1-207ENST00000483407 AP4E1Q9UPM8 1137 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 SCN1AP35498 2009 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ASPMQ8IZT6 3477 aa6.21□□□□□ -1.42
CSDE1-207ENST00000483407 ZFYVE26Q68DK2 2539 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 A0A087X0B3 334 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ANTXRLA6NF34 631 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 H0Y626 953 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 CLDN5O00501 218 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 RGS13O14921 159 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 HOXC11O43248 304 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 COCHO43405 550 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 OPHN1O60890 802 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ZNF217O75362 1048 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TULP3O75386 442 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TRIM16O95361 564 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 CST3P01034 146 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 SYPP08247 313 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 DRD2P14416 443 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 HOXB2P14652 356 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 HNRNPLP14866 589 aaKnown RBP eCLIP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TRIM21P19474 475 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 SYT1P21579 422 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 PTGER3P43115 390 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 TUBP50607 506 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 CYP2J2P51589 502 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 GFPT1Q06210 699 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 CYP24A1Q07973 514 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 GOLGA8FQ08AF8 430 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 GOLGA8DPQ0D2H9 430 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 BIRC3Q13489 604 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 HNRNPDQ14103 355 aaKnown RBP6.2□□□□□ -1.42
CSDE1-207ENST00000483407 STK38Q15208 465 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 NKG7Q16617 165 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ANO4Q32M45 955 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 FAM26FQ5R3K3 315 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 C10orf76Q5T2E6 689 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 ANKRD34AQ69YU3 496 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 FAM173BQ6P4H8 233 aa6.2□□□□□ -1.42
CSDE1-207ENST00000483407 SFTPA1Q8IWL2 248 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms