RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 C14orf80Q86SX3 495 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 AHI1Q8N157 1196 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.59■■□□□ 1.05
SEC13-217ENST00000482647 FNIP1Q8TF40 1166 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 IGSF8Q969P0 613 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 CHP1Q99653 195 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 CIPCQ9C0C6 399 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 RAB6CQ9H0N0 254 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 THAP2Q9H0W7 228 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 NHEJ1Q9H9Q4 299 aaPredicted RBP21.59■■□□□ 1.05
SEC13-217ENST00000482647 ELOVL2Q9NXB9 296 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 NENFQ9UMX5 172 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 CACNA1IQ9P0X4 2223 aa21.59■■□□□ 1.05
SEC13-217ENST00000482647 A0A1B0GVM2 712 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 TCAF2A6NFQ2 919 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 K7ESF4 209 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 NPC1O15118 1278 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 PABPC1P11940 636 aaKnown RBP21.58■■□□□ 1.05
SEC13-217ENST00000482647 HOXA6P31267 233 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 GGCXP38435 758 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 OGDHQ02218 1023 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 SCYL2Q6P3W7 929 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 KIAA0907Q7Z7F0 614 aaPredicted RBP21.58■■□□□ 1.05
SEC13-217ENST00000482647 CHPFQ8IZ52 775 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 CCAR2Q8N163 923 aaKnown RBP21.58■■□□□ 1.05
SEC13-217ENST00000482647 CAMKK1Q8N5S9 505 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 TC2NQ8N9U0 490 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 TMPRSS4Q9NRS4 437 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 KIAA1522Q9P206 1035 aaPredicted RBP21.58■■□□□ 1.05
SEC13-217ENST00000482647 HCN2Q9UL51 889 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 SNX10Q9Y5X0 201 aa21.58■■□□□ 1.05
SEC13-217ENST00000482647 SRGAP2O75044 1071 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 CLDN11O75508 207 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 CYP1A2P05177 515 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 TDGF1P13385 188 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 HNRNPLP14866 589 aaKnown RBP eCLIP21.57■■□□□ 1.04
SEC13-217ENST00000482647 NTSR1P30989 418 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 CD70P32970 193 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 DGKEP52429 567 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 GALCP54803 685 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 OXCT1P55809 520 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 EGFLAMQ63HQ2 1017 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 CHST9Q7L1S5 443 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 SLFN11Q7Z7L1 901 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 ADIPOR2Q86V24 386 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 WFDC5Q8TCV5 224 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 NTAN1Q96AB6 310 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 LMLNQ96KR4 655 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 OSBPL2Q9H1P3 480 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 ZDHHC4Q9NPG8 344 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 POLR3BQ9NW08 1133 aaPredicted RBP21.57■■□□□ 1.04
SEC13-217ENST00000482647 ZSCAN32Q9NX65 697 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 OR12D3Q9UGF7 316 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 PLA2G4CQ9UP65 541 aa21.57■■□□□ 1.04
SEC13-217ENST00000482647 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 DRGXA6NNA5 263 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 E9PAM4 449 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 SGK1O00141 431 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 ADAM23O75077 832 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 RNF8O76064 485 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 ATP5BP06576 529 aaKnown RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 POLR2EP19388 210 aaKnown RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 AIF1P55008 147 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 CDH4P55283 916 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 LMAN2Q12907 356 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 ZNF177Q13360 481 aaPredicted RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 CRY1Q16526 586 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 FSCBQ5H9T9 825 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 TMEM215Q68D42 235 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 ZC3H14Q6PJT7 736 aaKnown RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 CIR1Q86X95 450 aaPredicted RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 ZNF683Q8IZ20 524 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 CCDC185Q8N715 623 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 TSTD1Q8NFU3 115 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 ATRIPQ8WXE1 791 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 NELL1Q92832 810 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 PPP1R9BQ96SB3 815 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 THAP10Q9P2Z0 257 aaPredicted RBP21.56■■□□□ 1.04
SEC13-217ENST00000482647 PCDHGA2Q9Y5H1 932 aa21.56■■□□□ 1.04
SEC13-217ENST00000482647 MOCS3O95396 460 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 APBB3O95704 486 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 NHLH1Q02575 133 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 SCAPQ12770 1279 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 SLC12A1Q13621 1099 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 EFHC2Q5JST6 749 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 MBLAC2Q68D91 279 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 CTNNBL1Q8WYA6 563 aaPredicted RBP21.55■■□□□ 1.04
SEC13-217ENST00000482647 ACOX2Q99424 681 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 NCAPGQ9BPX3 1015 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 NUP85Q9BW27 656 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 TRIM7Q9C029 511 aa21.55■■□□□ 1.04
SEC13-217ENST00000482647 POLMQ9NP87 494 aaPredicted RBP21.55■■□□□ 1.04
SEC13-217ENST00000482647 IGLV3-10A0A075B6K4 115 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 H2AFZP0C0S5 128 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 IRAK1P51617 712 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 NRG1Q02297 640 aaPredicted RBP21.54■■□□□ 1.04
SEC13-217ENST00000482647 ACAP1Q15027 740 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 TMEM92Q6UXU6 159 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 H2AFVQ71UI9 128 aa21.54■■□□□ 1.04
SEC13-217ENST00000482647 LONP2Q86WA8 852 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms