RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 CISHQ9NSE2 258 aa9.84□□□□□ -0.83
SMARCE1-210ENST00000481231 STRIP2Q9ULQ0 834 aa9.84□□□□□ -0.83
SMARCE1-210ENST00000481231 MAPK8IP1Q9UQF2 711 aa9.84□□□□□ -0.83
SMARCE1-210ENST00000481231 HPSEQ9Y251 543 aa9.84□□□□□ -0.83
SMARCE1-210ENST00000481231 BSNQ9UPA5 3926 aa9.84□□□□□ -0.83
SMARCE1-210ENST00000481231 DFNA5O60443 496 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 TSPAN3O60637 253 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 RHOBTB3O94955 611 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 MT-CO3P00414 261 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 WNT1P04628 370 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 CYBBP04839 570 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 EPHX1P07099 455 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 EPHA8P29322 1005 aaPredicted RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 GTF2H1P32780 548 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 PSMC2P35998 433 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 RAD23BP54727 409 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 YWHAGP61981 247 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 UBAP2LQ14157 1087 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 ZCWPW2Q504Y3 356 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 RAB41Q5JT25 222 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 ARHGAP17Q68EM7 881 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 KRT39Q6A163 491 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 HIST2H2BCQ6DN03 193 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 SERPINA13PQ6UXR4 307 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 BHLHA9Q7RTU4 235 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 CPXM2Q8N436 756 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 GUF1Q8N442 669 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 ANKRD52Q8NB46 1076 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 DDI1Q8WTU0 396 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 NDRG1Q92597 394 aaKnown RBP9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 PLD4Q96BZ4 506 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 EEF2KMTQ96G04 330 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 SLC2A11Q9BYW1 496 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 ULBP1Q9BZM6 244 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 UBXN6Q9BZV1 441 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 ADAMTS1Q9UHI8 967 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 NUMA1Q14980 2115 aa9.83□□□□□ -0.84
SMARCE1-210ENST00000481231 TULP2O00295 520 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 VILLO15195 856 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 SUV39H1O43463 412 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 TIMM44O43615 452 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 USP12O75317 370 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 ZBED1O96006 694 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 IGHV4-34P06331 123 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CKMT2P17540 419 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CR2P20023 1033 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 RPL13P26373 211 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 HOXD9P28356 352 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 HLA-FP30511 346 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 SYKP43405 635 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 MXI1P50539 228 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 TKTL1P51854 596 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 NDUFA8P51970 172 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 BCAT1P54687 386 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 RACK1P63244 317 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 DPYDQ12882 1025 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 BNIP3Q12983 259 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 ILKQ13418 452 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 ADAM9Q13443 819 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CAMK2GQ13555 558 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 E2F5Q15329 346 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 TRIP4Q15650 581 aaPredicted RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 GOLGA7BQ2TAP0 167 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 PM20D1Q6GTS8 502 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 HSCBQ8IWL3 235 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CACTIN-AS1Q8N1I8 211 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 TTC39CQ8N584 583 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 ZNF366Q8N895 744 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 FBXL13Q8NEE6 735 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 OR2T3Q8NH03 318 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CYB5D2Q8WUJ1 264 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 CCDC47Q96A33 483 aaKnown RBP9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 BTBD1Q9H0C5 482 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 ASCL3Q9NQ33 180 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 STARD5Q9NSY2 213 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 MYH10P35580 1976 aa9.82□□□□□ -0.84
SMARCE1-210ENST00000481231 UTP20O75691 2785 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 FAM237AA0A1B0GTK4 181 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 FAM47DPA6NHR8 397 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 WNT9AO14904 365 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 AFPP02771 609 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SLC8A3P57103 927 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 ERVPABLB-1P60509 514 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 ARID5AQ03989 594 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 TLE1Q04724 770 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 PDE4CQ08493 712 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 ADIGQ0VDE8 80 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 LINC00303Q3SY05 128 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 FNDC3BQ53EP0 1204 aaKnown RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SFMBT2Q5VUG0 894 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 CCDC81Q6ZN84 652 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SMYD4Q8IYR2 804 aaPredicted RBP9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 EDEM1Q92611 657 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 TATDN2Q93075 761 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 FAXDC2Q96IV6 333 aa9.81□□□□□ -0.84
SMARCE1-210ENST00000481231 SPATA32Q96LK8 384 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms