RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 VASPP50552 380 aaPredicted RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 COPAP53621 1224 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 IRX4P78413 519 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 SLC6A3Q01959 620 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 CCDC15Q0P6D6 951 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 HNRNPA1L2Q32P51 320 aaKnown RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 PLEKHG6Q3KR16 790 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 MIIPQ5JXC2 388 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 PSAPL1Q6NUJ1 521 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 RFWD3Q6PCD5 774 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 ARCQ7LC44 396 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 CARNMT1Q8N4J0 409 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 PGAP3Q96FM1 320 aaPredicted RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 CCDC114Q96M63 670 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 PRICKLE1Q96MT3 831 aaPredicted RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 CPXM1Q96SM3 734 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 STK33Q9BYT3 514 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 SMOC1Q9H4F8 434 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 DNAAF2Q9NVR5 837 aaKnown RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 TNRC6BQ9UPQ9 1833 aaKnown RBP11.83□□□□□ -0.51
CCM2-213ENST00000480658 MUC22E2RYF6 1773 aaPredicted RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 WASH3PC4AMC7 463 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 CLDN11O75508 207 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 GABBR2O75899 941 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 CYP11B1P15538 503 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 DESP17661 470 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 SLC6A4P31645 630 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 CD70P32970 193 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 NUDT1P36639 197 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 ECT2LQ008S8 904 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 EIF4EBP2Q13542 120 aaPredicted RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 ELAVL3Q14576 367 aaKnown RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 SYCP1Q15431 976 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 PTPRNQ16849 979 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 ZC3H12AQ5D1E8 599 aaKnown RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 PITRM1Q5JRX3 1037 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 SYPL2Q5VXT5 272 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 TMEM215Q68D42 235 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 OLFML1Q6UWY5 402 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 LRRC31Q6UY01 552 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 TRIM72Q6ZMU5 477 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 SLC47A2Q86VL8 602 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 LGI2Q8N0V4 545 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 ADAM32Q8TC27 787 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 C18orf8Q96DM3 657 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 GPR174Q9BXC1 333 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 NUCKS1Q9H1E3 243 aaKnown RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 RSPH9Q9H1X1 276 aaPredicted RBP11.83□□□□□ -0.52
CCM2-213ENST00000480658 RETREG1Q9H6L5 497 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 SIX2Q9NPC8 291 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 TMEM74BQ9NUR3 256 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 STIM2Q9P246 746 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 CLEC4EQ9ULY5 219 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 THADAQ6YHU6 1953 aa11.83□□□□□ -0.52
CCM2-213ENST00000480658 NUP205Q92621 2012 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 MYOFQ9NZM1 2061 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 ANTXRLA6NF34 631 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 LRRC72A6NJI9 287 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 METTL12A8MUP2 240 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 PATE3B3GLJ2 98 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 F8VZ95 297 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 ALOX15BO15296 676 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 BCAT2O15382 392 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 DFNA5O60443 496 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 SEMA4FO95754 770 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 ZNF883P0CG24 379 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 PMLP29590 882 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 CSKP41240 450 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 MAPK8P45983 427 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 GABRB2P47870 512 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 PLK1P53350 603 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 RPS24P62847 133 aaKnown RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 MYL5Q02045 173 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 ZNF177Q13360 481 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 DRAP1Q14919 205 aaPredicted RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 STX1AQ16623 288 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 INAVAQ3KP66 663 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 SLC25A52Q3SY17 297 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 SH3PXD2AQ5TCZ1 1133 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 DCAF12L1Q5VU92 463 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 FAM46CQ5VWP2 391 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 RAP1GAP2Q684P5 730 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 NADSYN1Q6IA69 706 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 GJB7Q6PEY0 223 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 RBM43Q6ZSC3 357 aaKnown RBP11.82□□□□□ -0.52
CCM2-213ENST00000480658 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 ERICH1Q86X53 443 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 PASD1Q8IV76 773 aa11.82□□□□□ -0.52
CCM2-213ENST00000480658 SLC41A1Q8IVJ1 513 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms