RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 APOEP02649 317 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 TACR2P21452 398 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 OPRD1P41143 372 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 SLC11A2P49281 568 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 RPS24P62847 133 aaKnown RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 KRT83P78385 493 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 PIGHQ14442 188 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 MESDQ14696 234 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 SFTPA1Q8IWL2 248 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 RHOT2Q8IXI1 618 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 NAT16Q8N8M0 369 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 ATP6V0D2Q8N8Y2 350 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 DNASE1L2Q92874 299 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 ATP2A3Q93084 1043 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 TMA16Q96EY4 203 aaKnown RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 C1orf74Q96LT6 269 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 HAPLN3Q96S86 360 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 SPATA6Q9NWH7 488 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 GPATCH2LQ9NWQ4 482 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 MARK1Q9P0L2 795 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 IP6K2Q9UHH9 426 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 FBXO10Q9UK96 956 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 FZD10Q9ULW2 581 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 MTF2Q9Y483 593 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
TRA2B-212ENST00000480461 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
TRA2B-212ENST00000480461 DRGXA6NNA5 263 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 TMEM110-MUSTN1A8MSY1 372 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 BTNL10A8MVZ5 291 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 BUB1O43683 1085 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 NFATC1O95644 943 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 CISD3P0C7P0 127 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 TGM1P22735 817 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 PCK1P35558 622 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 CHKAP35790 457 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 GALK1P51570 392 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
TRA2B-212ENST00000480461 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
TRA2B-212ENST00000480461 SCAPQ12770 1279 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 FZD5Q13467 585 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 ACAP1Q15027 740 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 ANO4Q32M45 955 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 C5orf22Q49AR2 442 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 RNF43Q68DV7 783 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 SND1Q7KZF4 910 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRA2B-212ENST00000480461 SLFN11Q7Z7L1 901 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 CIR1Q86X95 450 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-212ENST00000480461 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 LGI2Q8N0V4 545 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 PHTF2Q8N3S3 785 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 CSGALNACT1Q8TDX6 532 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 EZH1Q92800 747 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-212ENST00000480461 NTAN1Q96AB6 310 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 OSBPL2Q9H1P3 480 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 PARD6AQ9NPB6 346 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 USP18Q9UMW8 372 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 NEU3Q9UQ49 428 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 PIAS3Q9Y6X2 628 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 COL4A2P08572 1712 aa12.64□□□□□ -0.39
TRA2B-212ENST00000480461 KANSL1LA0AUZ9 987 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 NEDD8-MDP1E9PL57 170 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 HOXC11O43248 304 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-212ENST00000480461 LILRB5O75023 590 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 RNF8O76064 485 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 CNTN5O94779 1100 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
TRA2B-212ENST00000480461 RARAP10276 462 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ADH5P11766 374 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 TYRP14679 529 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 HOXD9P28356 352 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-212ENST00000480461 CTHP32929 405 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
TRA2B-212ENST00000480461 PFKPQ01813 784 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 GAD2Q05329 585 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 CCDC173Q0VFZ6 552 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 SEMA3BQ13214 749 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ALFQ53S48 1182 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 FSCBQ5H9T9 825 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 KCNT1Q5JUK3 1230 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ERMARDQ5T6L9 678 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 MANEALQ5VSG8 457 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 CPA6Q8N4T0 437 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 OR52K2Q8NGK3 314 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 WFDC5Q8TCV5 224 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 NELL1Q92832 810 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 SHDQ96IW2 340 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 LMLNQ96KR4 655 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 SNRNP25Q9BV90 132 aaKnown RBP12.63□□□□□ -0.39
TRA2B-212ENST00000480461 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ZSCAN32Q9NX65 697 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 ZNF212Q9UDV6 495 aa12.63□□□□□ -0.39
TRA2B-212ENST00000480461 OR12D3Q9UGF7 316 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms