RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RHOBTB1O94844 696 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 MOCS2O96007 188 aaPredicted RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 PROS1P07225 676 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 PDGFRAP16234 1089 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 CORO1AP31146 461 aaKnown RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 NOS2P35228 1153 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 SCNN1AP37088 669 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 GSDMDP57764 484 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 RPL7AP62424 266 aaKnown RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 COG7P83436 770 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 MAMLD1Q13495 774 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 TRIP4Q15650 581 aaPredicted RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 CRY1Q16526 586 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 CDO1Q16878 200 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 C15orf59Q2T9L4 293 aaPredicted RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 RAB6CQ53S08 254 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 SH3PXD2AQ5TCZ1 1133 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 EMC10Q5UCC4 262 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ANO7Q6IWH7 933 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 PPP1R2P3Q6NXS1 205 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 MSANTD2Q6P1R3 559 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 DCUN1D2Q6PH85 259 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 RAD9BQ6WBX8 426 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 BEND5Q7L4P6 421 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 DDX42Q86XP3 938 aaKnown RBP eCLIP9.4□□□□□ -0.9
VCP-206ENST00000480327 TMTC1Q8IUR5 882 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 DENND1CQ8IV53 801 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 BBS7Q8IWZ6 715 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ADGRG2Q8IZP9 1017 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 IL17RCQ8NAC3 791 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 TSTD1Q8NFU3 115 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ACDQ96AP0 544 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ARHGEF26Q96DR7 871 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 TRIM11Q96F44 468 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 VCPIP1Q96JH7 1222 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 SERPINB11Q96P15 392 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 ADAM33Q9BZ11 813 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 TRIM7Q9C029 511 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 RAB6CQ9H0N0 254 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 TMEM74BQ9NUR3 256 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 PARVAQ9NVD7 372 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 DDIT4Q9NX09 232 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 CALCOCO1Q9P1Z2 691 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 MBD1Q9UIS9 605 aaPredicted RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 LSM7Q9UK45 103 aaKnown RBP9.4□□□□□ -0.9
VCP-206ENST00000480327 STAP1Q9ULZ2 295 aa9.4□□□□□ -0.9
VCP-206ENST00000480327 CACNA1GO43497 2377 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 PTPRBP23467 1997 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 E2F8A0AVK6 867 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 C2CD4BA6NLJ0 364 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 IRAK2O43187 625 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 GREM1O60565 184 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 ADAM23O75077 832 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 NFATC1O95644 943 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 KLKB1P03952 638 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 H2AFZP0C0S5 128 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 MYBL1P10243 752 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 GPD1P21695 349 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 FECHP22830 423 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 SDC4P31431 198 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 GBP1P32455 592 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 NOVA1P51513 510 aaKnown RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 GSCP56915 257 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 IRX4P78413 519 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 OGDHQ02218 1023 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 DEUP1Q05D60 604 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 DHCR24Q15392 516 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 ELF2Q15723 593 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 SLC25A52Q3SY17 297 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 CCDC14Q49A88 953 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 ZC3H12AQ5D1E8 599 aaKnown RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 PPP1R15BQ5SWA1 713 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 OTUD1Q5VV17 481 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 PLEKHA7Q6IQ23 1121 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 RHBDF2Q6PJF5 856 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 HTR3DQ70Z44 454 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 H2AFVQ71UI9 128 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 TMEM139Q8IV31 216 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 CCDC170Q8IYT3 715 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 ALLCQ8N6M5 410 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 RLN3Q8WXF3 142 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 CTNNBL1Q8WYA6 563 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 BTBD6Q96KE9 485 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 FCRL2Q96LA5 508 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 NPY6RQ99463 290 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 NUP85Q9BW27 656 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 PIGVQ9NUD9 493 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 AGO1Q9UL18 857 aaKnown RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 TFR2Q9UP52 801 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 HBS1LQ9Y450 684 aaKnown RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 EPN1Q9Y6I3 576 aaPredicted RBP9.39□□□□□ -0.91
VCP-206ENST00000480327 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
VCP-206ENST00000480327 TP53BP1Q12888 1972 aaPredicted RBP9.38□□□□□ -0.91
VCP-206ENST00000480327 GOLGA6L7A0A1B0GV03 622 aa9.38□□□□□ -0.91
VCP-206ENST00000480327 TMEM191CA6NGB0 347 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms