RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.97□□□□□ -0.33
SIK3-209ENST00000480222 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 RTL3Q8N8U3 475 aaKnown RBP12.97□□□□□ -0.33
SIK3-209ENST00000480222 ADAMTS19Q8TE59 1207 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 ATG4AQ8WYN0 398 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 HAUS1Q96CS2 278 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
SIK3-209ENST00000480222 FAM161BQ96MY7 647 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 OLFM3Q96PB7 478 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 CYP2S1Q96SQ9 504 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 KRT12Q99456 494 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 COL25A1Q9BXS0 654 aaPredicted RBP12.97□□□□□ -0.33
SIK3-209ENST00000480222 MAGEB5Q9BZ81 275 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 GKN1Q9NS71 199 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 CFAP97Q9P2B7 532 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 AGO1Q9UL18 857 aaKnown RBP12.97□□□□□ -0.33
SIK3-209ENST00000480222 VANGL2Q9ULK5 521 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 R3HDM2Q9Y2K5 976 aaKnown RBP12.97□□□□□ -0.33
SIK3-209ENST00000480222 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
SIK3-209ENST00000480222 CFAP69A5D8W1 941 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 DRGXA6NNA5 263 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 LEFTY2O00292 366 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 PPP1R12AO14974 1030 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 MFSD11O43934 449 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 GREM1O60565 184 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 TBX10O75333 385 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 KLKB1P03952 638 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 ITGAVP06756 1048 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 MX2P20592 715 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 AMPD1P23109 780 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 COILP38432 576 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 MAPKAPK2P49137 400 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 DR1Q01658 176 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 ADGRE1Q14246 886 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 OASLQ15646 514 aaKnown RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 NPAS3Q8IXF0 933 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 CPXM2Q8N436 756 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 HJURPQ8NCD3 748 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 SH3RF2Q8TEC5 729 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 C1orf54Q8WWF1 131 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 USP13Q92995 863 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 RPRD1AQ96P16 312 aaPredicted RBP12.96□□□□□ -0.33
SIK3-209ENST00000480222 BRD8Q9H0E9 1235 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 TDP1Q9NUW8 608 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 CLEC1BQ9P126 229 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 SNX10Q9Y5X0 201 aa12.96□□□□□ -0.33
SIK3-209ENST00000480222 KIF26AQ9ULI4 1882 aaPredicted RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 DOCK6Q96HP0 2047 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 A0A1B0GVM2 712 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 TARSL2A2RTX5 802 aaKnown RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 TCAF2A6NFQ2 919 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 FAM187AA6NFU0 413 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 HACD1B0YJ81 288 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 PRAMEF12O95522 483 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ECEL1O95672 775 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 RBP3P10745 1247 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 SLC6A4P31645 630 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 CHKAP35790 457 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 MTHFRP42898 656 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 ZXDBP98169 803 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 GBE1Q04446 702 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 PDK1Q15118 436 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ZNF77Q15935 545 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ATAT1Q5SQI0 421 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ARTNQ5T4W7 220 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 C14orf80Q86SX3 495 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 NLRP14Q86W24 1093 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 CCDC105Q8IYK2 499 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 LGI2Q8N0V4 545 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 CELF5Q8N6W0 485 aaKnown RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 ATL2Q8NHH9 583 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ZSCAN18Q8TBC5 510 aaPredicted RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 CCHCR1Q8TD31 782 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ING5Q8WYH8 240 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 OTUB2Q96DC9 234 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 CCDC114Q96M63 670 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 PRICKLE1Q96MT3 831 aaPredicted RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 NECTIN4Q96NY8 510 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 QKIQ96PU8 341 aaKnown RBP eCLIP12.95□□□□□ -0.34
SIK3-209ENST00000480222 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 RAB17Q9H0T7 212 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 ETNK2Q9NVF9 386 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 CLDND1Q9NY35 253 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 OBP2AQ9NY56 170 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 AMACRQ9UHK6 382 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 DNPEPQ9ULA0 475 aa12.95□□□□□ -0.34
SIK3-209ENST00000480222 DRG1Q9Y295 367 aaKnown RBP12.95□□□□□ -0.34
SIK3-209ENST00000480222 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms