RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SLC2A4RGQ9NR83 387 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 MPP6Q9NZW5 540 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 MARK1Q9P0L2 795 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 PPARGC1AQ9UBK2 798 aaKnown RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 PACSIN2Q9UNF0 486 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 JRKLQ9Y4A0 524 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 IGLV3-10A0A075B6K4 115 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 PI4K2BG5E9Z4 385 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 H0Y626 953 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 HOXC11O43248 304 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CLDN11O75508 207 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 PENKP01210 267 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 KRT1P04264 644 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 GOT1P17174 413 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 KDELR1P24390 212 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CTNNA2P26232 953 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 DEKP35659 375 aaKnown RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 HCAR3P49019 387 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 DNA2P51530 1060 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 SGSHP51688 502 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 RWDD2BP57060 319 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 GNG11P61952 73 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 ZNF177Q13360 481 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 C5orf22Q49AR2 442 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 MEI1Q5TIA1 1274 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 MANEALQ5VSG8 457 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 KATNAL2Q8IYT4 538 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 ZNF683Q8IZ20 524 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CARNMT1Q8N4J0 409 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 NAT16Q8N8M0 369 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 RAPGEF5Q92565 580 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 HES6Q96HZ4 224 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 UHRF1Q96T88 793 aaPredicted RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CATSPERBQ9H7T0 1116 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 PCDH18Q9HCL0 1135 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CD320Q9NPF0 282 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
CLDN11-205ENST00000480067 CWC15Q9P013 229 aaKnown RBP11.54□□□□□ -0.56
CLDN11-205ENST00000480067 BDP1A6H8Y1 2624 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 A0A1B0GVM2 712 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 TCAF2A6NFQ2 919 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CNTN5O94779 1100 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CD48P09326 243 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 GLULP15104 373 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 RHOQP17081 205 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 HOXD9P28356 352 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 OR1E1P30953 314 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 GJA4P35212 333 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CETN2P41208 172 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 MARCKSL1P49006 195 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 PEX5P50542 639 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CDH4P55283 916 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CDH18Q13634 790 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 SLC44A4Q53GD3 710 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 ALFQ53S48 1182 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 TFAP2DQ7Z6R9 452 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CIR1Q86X95 450 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CCDC50Q8IVM0 306 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 MFN1Q8IWA4 741 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 SLC35F6Q8N357 371 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 ZNF557Q8N988 423 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 EXD1Q8NHP7 514 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 EXOC4Q96A65 974 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 CSPG4P5Q96PW8 444 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 MAK16Q9BXY0 300 aaKnown RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 SLC2A11Q9BYW1 496 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 RETREG1Q9H6L5 497 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 C8orf33Q9H7E9 229 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 HEBP1Q9NRV9 189 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 RCOR3Q9P2K3 495 aaPredicted RBP11.53□□□□□ -0.56
CLDN11-205ENST00000480067 MUTYHQ9UIF7 546 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 FBXL21Q9UKT6 434 aa11.53□□□□□ -0.56
CLDN11-205ENST00000480067 HELZP42694 1942 aaKnown RBP11.52□□□□□ -0.56
CLDN11-205ENST00000480067 ENC1O14682 589 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 CACNG3O60359 315 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 LUC7L3O95232 432 aaKnown RBP11.52□□□□□ -0.57
CLDN11-205ENST00000480067 IL4RP24394 825 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 IRAK1P51617 712 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 ARSEP51690 589 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 DPYSL3Q14195 570 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 PREPLQ4J6C6 727 aaPredicted RBP11.52□□□□□ -0.57
CLDN11-205ENST00000480067 CHST9Q7L1S5 443 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 FAM71BQ8TC56 605 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 ALG3Q92685 438 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 P2RY11Q96G91 374 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 ZNF670Q9BS34 389 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 DNAJC17Q9NVM6 304 aaKnown RBP11.52□□□□□ -0.57
CLDN11-205ENST00000480067 DEC1Q9P2X7 70 aa11.52□□□□□ -0.57
CLDN11-205ENST00000480067 PIAS3Q9Y6X2 628 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms