RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHD6-208ENST00000480022 CDC14AQ9UNH5 594 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 SLC8A2Q9UPR5 921 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 DRG1Q9Y295 367 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 ANKRD34BA5PLL1 514 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 TMX2-CTNND1H3BSU7 103 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 PROSCO94903 275 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 FAM13AO94988 1023 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 IFNB1P01574 187 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 CYP11B1P15538 503 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 TSHRP16473 764 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 NELFEP18615 380 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 EIF2AK2P19525 551 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 UBXN2AP68543 259 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 ALCAMQ13740 583 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 KAZNQ674X7 775 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 C14orf80Q86SX3 495 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 MYCT1Q8N699 235 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 DNERQ8NFT8 737 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 SERPINI1Q99574 410 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 SH3GL1Q99961 368 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 WDR83Q9BRX9 315 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 CEP44Q9C0F1 390 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 RPF2Q9H7B2 306 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 CLK4Q9HAZ1 481 aaKnown RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 OLAHQ9NV23 265 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 GABRQQ9UN88 632 aa11.14□□□□□ -0.63
CHD6-208ENST00000480022 FARP1Q9Y4F1 1045 aaPredicted RBP11.14□□□□□ -0.63
CHD6-208ENST00000480022 TNFRSF10AO00220 468 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 HSPA1AP0DMV8 641 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 HSPA1BP0DMV9 641 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 HSPA8P11142 646 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 TCEA1P23193 301 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 SREBF1P36956 1147 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 CDH15P55291 814 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TAS2R40P59535 323 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PRKCZQ05513 592 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 ITGADQ13349 1161 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PEX6Q13608 980 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 FLOT2Q14254 428 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 EPC2Q52LR7 807 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 FAM209AQ5JX71 171 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PLEKHA7Q6IQ23 1121 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 EEPD1Q7L9B9 569 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SETD3Q86TU7 594 aaPredicted RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 CARM1Q86X55 608 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PPIL6Q8IXY8 311 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 IL31RAQ8NI17 732 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 CRYGNQ8WXF5 182 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 OSBPL11Q9BXB4 747 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TDRD1Q9BXT4 1180 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 C10orf88Q9H8K7 445 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 AVENQ9NQS1 362 aaPredicted RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 VPS51Q9UID3 782 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 A0A087WXM4 84 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 A0A1W2PPW3 197 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TRIM64CA6NLI5 447 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TRIM49D1C9J1S8 452 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 E7ESA3 106 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 H0YJX3 145 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 CYB561D2O14569 222 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 HOXC6P09630 235 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SPATA31C1P0DKV0 1188 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 CYP2B6P20813 491 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 IGBP1P78318 339 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 BNIP3Q12983 259 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PGM5Q15124 567 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SF3B4Q15427 424 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHD6-208ENST00000480022 LYSMD3Q7Z3D4 306 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SLFN12Q8IYM2 578 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 PIWIL2Q8TC59 973 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 HPS1Q92902 700 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PDCD2LQ9BRP1 358 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SIAEQ9HAT2 523 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TMA7Q9Y2S6 64 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 PRSS51A0A1B0GVH4 220 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 H3BMQ9 156 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 SGK1O00141 431 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 MYL4P12829 197 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 KRT10P13645 584 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 FOSL1P15407 271 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 ZNF26P17031 533 aaPredicted RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 POLR2EP19388 210 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 ATICP31939 592 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 FLT3LGP49771 235 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 DLG4P78352 724 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 NFX1Q12986 1120 aaKnown RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 FXNQ16595 210 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 TTC39BQ5VTQ0 682 aaPredicted RBP11.13□□□□□ -0.63
CHD6-208ENST00000480022 ANKRD22Q5VYY1 191 aa11.13□□□□□ -0.63
CHD6-208ENST00000480022 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms