RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 SLC38A8A6NNN8 435 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TISP43B9A030 160 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 DDX3YO15523 660 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 MAP4P27816 1152 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 TUBP50607 506 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 CYP4F8P98187 520 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 CAP1Q01518 475 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 GPR17Q13304 367 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 PLCL1Q15111 1095 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 CNGA2Q16280 664 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 KLHL38Q2WGJ6 581 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 RAPH1Q70E73 1250 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TRIM42Q8IWZ5 723 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 FBXO25Q8TCJ0 367 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 CHMP6Q96FZ7 201 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 GTPBP2Q9BX10 602 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 HEMGNQ9BXL5 484 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 SARS2Q9NP81 518 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 GKN1Q9NS71 199 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 KLHL11Q9NVR0 708 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 NOCTQ9UK39 431 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 MAFFQ9ULX9 164 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 LZTS1Q9Y250 596 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 EXOC1LA0A1B0GW35 172 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 LINC01553A4QN01 128 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 GRM6O15303 877 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TRUB2O95900 331 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 C4BPAP04003 597 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 NUDT17P0C025 328 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 MYBL2P10244 700 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 STIP1P31948 543 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 HALP42357 657 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 SEC13P55735 322 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 P3H1Q32P28 736 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TPRG1Q6ZUI0 275 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TFAP2DQ7Z6R9 452 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 PYROXD1Q8WU10 500 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 HMGB4Q8WW32 186 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 ARHGEF2Q92974 986 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 KAT5Q92993 513 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 NXPE3Q969Y0 559 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 FAF2Q96CS3 445 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 SCYL1Q96KG9 808 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 YIPF2Q9BWQ6 316 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TAS2R14Q9NYV8 317 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 TPX2Q9ULW0 747 aaKnown RBP6.12□□□□□ -1.43
CPS1-207ENST00000479988 EFR3BQ9Y2G0 817 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 QSER1Q2KHR3 1735 aa6.12□□□□□ -1.43
CPS1-207ENST00000479988 UBA6A0AVT1 1052 aaPredicted RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 MBLAC1A4D2B0 266 aaPredicted RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 TEX28O15482 410 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 SPAG6O75602 509 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 MICAL2O94851 1124 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 RHOP08100 348 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 GSTA1P08263 222 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 GSTA2P09210 222 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 TROVE2P10155 538 aaKnown RBP eCLIP6.11□□□□□ -1.43
CPS1-207ENST00000479988 PYGMP11217 842 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 NOS2P35228 1153 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 BCL2L1Q07817 233 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 FOXR1Q6PIV2 292 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 FRA10AC1Q70Z53 315 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 DEFB106AQ8N104 65 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 LMO3Q8TAP4 145 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 FAM172AQ8WUF8 416 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 BSNDQ8WZ55 320 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 CENPTQ96BT3 561 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 CCT8L2Q96SF2 557 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 PRKD2Q9BZL6 878 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 ADAM7Q9H2U9 754 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 IGSF5Q9NSI5 407 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 VANGL2Q9ULK5 521 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 ERVW-1Q9UQF0 538 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 CASP8AP2Q9UKL3 1982 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 DDHD2O94830 711 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 PSMC3P17980 439 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 ADSSP30520 456 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 SLC10A6Q3KNW5 377 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 FBXO43Q4G163 708 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 HABP4Q5JVS0 413 aaKnown RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 ADCK2Q7Z695 626 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 PRELID2Q8N945 189 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 TSEN2Q8NCE0 465 aaKnown RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 SEMA4DQ92854 862 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 SMARCD2Q92925 531 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 KLHL5Q96PQ7 755 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 KXD1Q9BQD3 176 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 DUSP16Q9BY84 665 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 UBA2Q9UBT2 640 aaPredicted RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 TLK1Q9UKI8 766 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 CDH7Q9ULB5 785 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 MYH11P35749 1972 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 MEFVO15553 781 aaPredicted RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 RNASEH2AO75792 299 aaKnown RBP6.11□□□□□ -1.43
CPS1-207ENST00000479988 ANXA9O76027 345 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 ACSL3O95573 720 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 RARAP10276 462 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 KCNE1P15382 129 aa6.11□□□□□ -1.43
CPS1-207ENST00000479988 IFT88Q13099 833 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms