RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
TRAPPC12-218ENST00000479897 DNAI1Q9UI46 699 aa12.94□□□□□ -0.34
TRAPPC12-218ENST00000479897 VANGL2Q9ULK5 521 aa12.94□□□□□ -0.34
TRAPPC12-218ENST00000479897 WNT6Q9Y6F9 365 aa12.94□□□□□ -0.34
TRAPPC12-218ENST00000479897 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ARNTLO00327 626 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 KCNK3O14649 394 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 SCAMP3O14828 347 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 DCLK1O15075 740 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 HOXC11O43248 304 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CREB3O43889 395 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CLDN11O75508 207 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CYP17A1P05093 508 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 PYGMP11217 842 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 RHOQP17081 205 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CASQ1P31415 396 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 MAPKAPK2P49137 400 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CDH4P55283 916 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZP2Q05996 745 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ODF2Q5BJF6 829 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ANKRD20A8PQ5CZ79 823 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZFYVE27Q5T4F4 411 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 SLC9A4Q6AI14 798 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 RFWD3Q6PCD5 774 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 NLRP14Q86W24 1093 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 YAF2Q8IY57 180 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ADGRG2Q8IZP9 1017 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 RASGEF1CQ8N431 466 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZNF557Q8N988 423 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 IRF7Q92985 503 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 IGSF8Q969P0 613 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 MYEOVQ96EZ4 313 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 RNF157Q96PX1 679 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 OSBPL9Q96SU4 736 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 TRMT61BQ9BVS5 477 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CALN1Q9BXU9 219 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 CATSPERBQ9H7T0 1116 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 KCNK12Q9HB15 430 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 TMEM248Q9NWD8 314 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 SNX10Q9Y5X0 201 aa12.93□□□□□ -0.34
TRAPPC12-218ENST00000479897 C19orf67A6NJJ6 358 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 ADH1CP00326 375 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 CYBBP04839 570 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 SP100P23497 879 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 HOXD9P28356 352 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 EPHB2P29323 1055 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 DNA2P51530 1060 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 IRAK1P51617 712 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 SGSHP51688 502 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 VCPP55072 806 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 KLF1Q13351 362 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 CCDC50Q8IVM0 306 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 PQLC3Q8N755 202 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 RTL3Q8N8U3 475 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 PCDH19Q8TAB3 1148 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 DNASE1L2Q92874 299 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 RNF25Q96BH1 459 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 TMA16Q96EY4 203 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 RPP25Q9BUL9 199 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 OSBPL8Q9BZF1 889 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 LINC00597Q9H2U6 94 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 HPS4Q9NQG7 708 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 STIM2Q9P246 746 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 SAR1BQ9Y6B6 198 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 MYO10Q9HD67 2058 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 MIA3Q5JRA6 1907 aa12.92□□□□□ -0.34
TRAPPC12-218ENST00000479897 CACNG3O60359 315 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 SRGAP2O75044 1071 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ERCC2P18074 760 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 SERPINB6P35237 376 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 RPS24P62847 133 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 GAD2Q05329 585 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 TFDP2Q14188 446 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 GRM2Q14416 872 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 PAFAH1B3Q15102 231 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 DHCR24Q15392 516 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ALFQ53S48 1182 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 LY6G5CQ5SRR4 150 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 NCBP2-AS2Q69YL0 99 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 TRIM68Q6AZZ1 485 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 RHBDF2Q6PJF5 856 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 SETD3Q86TU7 594 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 CPA6Q8N4T0 437 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 LZTR1Q8N653 840 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
TRAPPC12-218ENST00000479897 P2RY11Q96G91 374 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms