RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 SLC9A7Q96T83 725 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 HNRNPABQ99729 332 aaKnown RBP6.33□□□□□ -1.4
CMSS1-203ENST00000478909 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
CMSS1-203ENST00000478909 KLC2Q9H0B6 622 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SDCBP2Q9H190 292 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 ADAM7Q9H2U9 754 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SNX25Q9H3E2 840 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 PLEKHA4Q9H4M7 779 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SETD4Q9NVD3 440 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 PSMC3IPQ9P2W1 217 aaPredicted RBP6.33□□□□□ -1.4
CMSS1-203ENST00000478909 STAP1Q9ULZ2 295 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SCN10AQ9Y5Y9 1956 aa6.33□□□□□ -1.4
CMSS1-203ENST00000478909 SMIM28A0A1B0GU29 152 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 A8MXQ7 604 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 E5RJQ4 531 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GOLGA8SH3BPF8 625 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 AP3B1O00203 1094 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TRDMT1O14717 391 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TM9SF1O15321 606 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 NCAM2O15394 837 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 MTSS1O43312 755 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PAX4O43316 350 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 DAB1O75553 588 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RECQL4O94761 1208 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SUN1O94901 812 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 ZWINTO95229 277 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 ACSL3O95573 720 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SHBGP04278 402 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GJB1P08034 283 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 FAM87AP0C7U9 286 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RBP3P10745 1247 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 MLNP12872 115 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CHN1P15882 459 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PECAM1P16284 738 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TPSB2P20231 275 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CNTFP26441 200 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 STX2P32856 288 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 HTR7P34969 479 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RAP1GAPP47736 663 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CTCFP49711 727 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GEMIN4P57678 1058 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GJA9P57773 515 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 EIF3EP60228 445 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SARNPP82979 210 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 NAB1Q13506 487 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 DPYSL3Q14195 570 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 KRT81Q14533 505 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TAF1CQ15572 869 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TPSAB1Q15661 275 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 MAPRE1Q15691 268 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 FSCN1Q16658 493 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 KYNUQ16719 465 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 KIZQ2M2Z5 673 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 LACTB2Q53H82 288 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 LGSNQ5TDP6 509 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 KAZNQ674X7 775 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 ALG1LQ6GMV1 187 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 OR6B2Q6IFH4 312 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 C6orf89Q6UWU4 347 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 C17orf99Q6UX52 265 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CCDC121Q6ZUS5 278 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 FAM183BPQ6ZVS7 135 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PIGWQ7Z7B1 504 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RFX6Q8HWS3 928 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SCML4Q8N228 414 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 NAT8LQ8N9F0 302 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 ZNF398Q8TD17 642 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 GPBAR1Q8TDU6 330 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PYROXD1Q8WU10 500 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RXFP2Q8WXD0 754 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 MAGEB18Q96M61 343 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 UROC1Q96N76 676 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PPP1R2P1Q96PQ5 205 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 RNF157Q96PX1 679 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 TWNKQ96RR1 684 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CYTH2Q99418 400 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 HERPUD2Q9BSE4 406 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 MTG1Q9BT17 334 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 NAT9Q9BTE0 207 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 DHRS4Q9BTZ2 278 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 EMILIN2Q9BXX0 1053 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 UPF3AQ9H1J1 476 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 R3HDMLQ9H3Y0 253 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 XAB2Q9HCS7 855 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PNPLA8Q9NP80 782 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 PPANQ9NQ55 473 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 EIF2B3Q9NR50 452 aaKnown RBP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CACNA2D2Q9NY47 1150 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 SNTG2Q9NY99 539 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 CYTH4Q9UIA0 394 aa6.32□□□□□ -1.4
CMSS1-203ENST00000478909 ZNF180Q9UJW8 692 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms