RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 PLXND1Q9Y4D7 1925 aa8.21□□□□□ -1.1
DDX39B-218ENST00000478365 PRR23AA6NEV1 266 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SIGLEC16A6NMB1 481 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 H0Y626 953 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 GOLGA8SH3BPF8 625 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SYNCRIPO60506 623 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 GFRA3O60609 400 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 CLDN11O75508 207 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 GRAP2O75791 330 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 RPP40O75818 363 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 RHOBTB1O94844 696 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ENDOD1O94919 500 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 LUC7L3O95232 432 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SERPING1P05155 500 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 DLDP09622 509 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 PDGFRAP16234 1089 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 TACR2P21452 398 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 HTR7P34969 479 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ETFBP38117 255 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 NNMTP40261 264 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 FNTBP49356 437 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 CDH4P55283 916 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 RNASE9P60153 205 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ST8SIA6P61647 398 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 NRG1Q02297 640 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ENPP2Q13822 863 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 TAF5Q15542 800 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ELF2Q15723 593 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 TDRD12Q587J7 1177 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SPDYCQ5MJ68 293 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 NAIF1Q69YI7 327 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SPECC1LQ69YQ0 1117 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 DCUN1D2Q6PH85 259 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ZNF783Q6ZMS7 281 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 LGI2Q8N0V4 545 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 FNIP1Q8TF40 1166 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 RUBCNQ92622 972 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 EZH1Q92800 747 aaPredicted RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 BHMTQ93088 406 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SYT11Q9BT88 431 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 CIPCQ9C0C6 399 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 MRPL47Q9HD33 250 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 METTL5Q9NRN9 209 aaKnown RBP8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ABCB8Q9NUT2 735 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 PARVAQ9NVD7 372 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 FAM86C1Q9NVL1 165 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 ARHGEF38Q9NXL2 777 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 PLK2Q9NYY3 685 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 IFNKQ9P0W0 207 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SUN2Q9UH99 717 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 PCDHGA5Q9Y5G8 931 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 R4GN57 208 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 SPTBN4Q9H254 2564 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 CKAP5Q14008 2032 aa8.2□□□□□ -1.1
DDX39B-218ENST00000478365 GON4LQ3T8J9 2241 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SYNJ2BP-COX16A0A087WUM0 186 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 C2CD4BA6NLJ0 364 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 PRRT4C9JH25 899 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SGK1O00141 431 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 TSPAN3O60637 253 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 RTN2O75298 545 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 PAGE1O75459 146 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 RETP07949 1114 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SRPRAP08240 638 aaKnown RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 GPD1P21695 349 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 HLA-FP30511 346 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SLC6A4P31645 630 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 HNRNPH3P31942 346 aaKnown RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 FLT3P36888 993 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 VASPP50552 380 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZNF135P52742 658 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZNF143P52747 638 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZBTB16Q05516 673 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 PTP4A2Q12974 167 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZNF177Q13360 481 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SIM2Q14190 667 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ZKSCAN8Q15776 578 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 C5orf22Q49AR2 442 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 C6orf118Q5T5N4 469 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 EGFLAMQ63HQ2 1017 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 RAP1GAP2Q684P5 730 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 HEATR6Q6AI08 1181 aaKnown RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 PKN3Q6P5Z2 889 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 RFWD3Q6PCD5 774 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 TSSK4Q6SA08 328 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SARM1Q6SZW1 724 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SERPINA13PQ6UXR4 307 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SLC36A4Q6YBV0 504 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 BNIPLQ7Z465 357 aa8.19□□□□□ -1.1
DDX39B-218ENST00000478365 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 SETD3Q86TU7 594 aaPredicted RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 METTL3Q86U44 580 aaKnown RBP8.19□□□□□ -1.1
DDX39B-218ENST00000478365 MCOLN2Q8IZK6 566 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms