RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 KDM1BQ8NB78 822 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 KIAA0895Q8NCT3 520 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 LMLNQ96KR4 655 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 MRGPRX3Q96LB0 322 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 HEXIM2Q96MH2 286 aaKnown RBP21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 ZNF578Q96N58 590 aaPredicted RBP21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 OMDQ99983 421 aa21.05■□□□□ 0.96
PDLIM1-202ENST00000477757 MSI1O43347 362 aaKnown RBP21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 LATO43561 262 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 SLC8A3P57103 927 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 CUL4BQ13620 913 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 C9orf64Q5T6V5 341 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 ARHGAP17Q68EM7 881 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 NAPEPLDQ6IQ20 393 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 KDM7AQ6ZMT4 941 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 SPATS2Q86XZ4 545 aaKnown RBP21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 MMAAQ8IVH4 418 aaKnown RBP21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 DHX40Q8IX18 779 aaKnown RBP21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 AADATQ8N5Z0 425 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 FAM181AQ8N9Y4 354 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 RNF139Q8WU17 664 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 NDRG1Q92597 394 aaKnown RBP21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 CPNE5Q9HCH3 593 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 SFMBT1Q9UHJ3 866 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 MTMR6Q9Y217 621 aa21.04■□□□□ 0.96
PDLIM1-202ENST00000477757 B8ZZF3 427 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 PDXKO00764 312 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 TBL1XO60907 577 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 DXOO77932 396 aaKnown RBP21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 MT-CO3P00414 261 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 SLC8A1P32418 973 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 CSKP41240 450 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 VAMP7P51809 220 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 E2F1Q01094 437 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 STK4Q13043 487 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 PIK3R6Q5UE93 754 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 CEP135Q66GS9 1140 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 RFWD3Q6PCD5 774 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 MFN1Q8IWA4 741 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 MFSD2AQ8NA29 543 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 ANKRD52Q8NB46 1076 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 SLC4A11Q8NBS3 891 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 NAF1Q96HR8 494 aaKnown RBP21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 ZSCAN16Q9H4T2 348 aaPredicted RBP21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 FRMD4BQ9Y2L6 1034 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 PCDHB1Q9Y5F3 818 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 PTPN13Q12923 2485 aa21.03■□□□□ 0.96
PDLIM1-202ENST00000477757 PIEZO2Q9H5I5 2752 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 MAPK13O15264 365 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 POLR2DO15514 142 aaKnown RBP21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 ARHGAP6O43182 974 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 IRAK2O43187 625 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 CUTAO60888 179 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 TRIM49P0CI25 452 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 TRIM49CP0CI26 452 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 C6P13671 934 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 GOT1P17174 413 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 GCLMP48507 274 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 PPP2CBP62714 309 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 PPP2CAP67775 309 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 PPP3CAQ08209 521 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 FAM133BQ5BKY9 247 aaKnown RBP21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 ARHGAP40Q5TG30 622 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 BSPRYQ5W0U4 402 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 SND1Q7KZF4 910 aaKnown RBP eCLIP21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 IQCHQ86VS3 1027 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 TTC39CQ8N584 583 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 FIBINQ8TAL6 211 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 SNRNP27Q8WVK2 155 aaKnown RBP21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 EDEM1Q92611 657 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 TTC9Q92623 222 aa21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 INTS6Q9UL03 887 aaKnown RBP21.02■□□□□ 0.96
PDLIM1-202ENST00000477757 ITIH6Q6UXX5 1313 aa21.02■□□□□ 0.95
PDLIM1-202ENST00000477757 UBR5O95071 2799 aaPredicted RBP21.02■□□□□ 0.95
PDLIM1-202ENST00000477757 TARSL2A2RTX5 802 aaKnown RBP21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 TULP2O00295 520 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 XPO1O14980 1071 aaKnown RBP21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 SIGLEC6O43699 453 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 KLRC4O43908 158 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 ADH1BP00325 375 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 IGLV3-27P01718 113 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 SLC6A4P31645 630 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 PSMD8P48556 350 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 RAD23BP54727 409 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 OVGP1Q12889 678 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 ZNF211Q13398 564 aaPredicted RBP21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 HJURPQ8NCD3 748 aaPredicted RBP21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 CCDC150Q8NCX0 1101 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 OR14C36Q8NHC7 312 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 FAXDC2Q96IV6 333 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 PRICKLE1Q96MT3 831 aaPredicted RBP21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 CISHQ9NSE2 258 aa21.01■□□□□ 0.95
PDLIM1-202ENST00000477757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21■□□□□ 0.95
PDLIM1-202ENST00000477757 EDDM13A0A1B0GTR0 161 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 YJEFN3A6XGL0 299 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 E7ENQ6 273 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 TRIM38O00635 465 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 SDC3O75056 442 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 MPOP05164 745 aa21■□□□□ 0.95
PDLIM1-202ENST00000477757 C5AR1P21730 350 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms