RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 STRCQ7RTU9 1775 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 LRPPRCP42704 1394 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 PIK3R4Q99570 1358 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 TMEM272A0A1B0GTI8 110 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 FAM90A8PA6NJQ4 464 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 IL18RAPO95256 599 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 SYF2O95926 243 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 FAM90A13PP0C7W8 464 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 FAM90A24PP0C7X0 464 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 HSPA5P11021 654 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 ATICP31939 592 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 IDUAP35475 653 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 PIK3CBP42338 1070 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 B4GALNT1Q00973 533 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 IFIT5Q13325 482 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 GAB1Q13480 694 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 BFSP2Q13515 415 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 DAG1Q14118 895 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 CNGA3Q16281 694 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 MZT2AQ6P582 158 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 KSR2Q6VAB6 950 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 DPP9Q86TI2 863 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 TMEM199Q8N511 208 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 MPLKIPQ8TAP9 179 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 SUN3Q8TAQ9 357 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 ZDHHC12Q96GR4 267 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 NAA15Q9BXJ9 866 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 SLC25A32Q9H2D1 315 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 ABHD10Q9NUJ1 306 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 ASNSD1Q9NWL6 643 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 SEMA5BQ9P283 1151 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 SNX13Q9Y5W8 968 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 CHD2O14647 1828 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 KNDC1Q76NI1 1749 aa4.71□□□□□ -1.66
UBR3-209ENST00000477461 TCF20Q9UGU0 1960 aaKnown RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 CENPJQ9HC77 1338 aaPredicted RBP4.71□□□□□ -1.66
UBR3-209ENST00000477461 ADGRB1O14514 1584 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 METP08581 1390 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 COL15A1P39059 1388 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ABCC11Q96J66 1382 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ARHGEF28Q8N1W1 1705 aaKnown RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 RHPN2P1A8MT19 583 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ZNF814B7Z6K7 855 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 PRR23D1E9PI22 279 aaPredicted RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 PMM2O15305 246 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 FGF2P09038 288 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 PRR23D2P0DMB1 279 aaPredicted RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 DRD1P21728 446 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 RPS6KB1P23443 525 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 KRTAP10-7P60409 375 aaPredicted RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 PPATQ06203 517 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ZNF543Q08ER8 600 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 PICALMQ13492 652 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 CLCA4Q14CN2 919 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 MAP9Q49MG5 647 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 AASDHQ4L235 1098 aaPredicted RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 UBAP2Q5T6F2 1119 aaKnown RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 LVRNQ6Q4G3 990 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 RBM44Q6ZP01 1051 aaKnown RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 NOL8Q76FK4 1167 aaKnown RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 B4GALNT4Q76KP1 1039 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ZPBPQ9BS86 351 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 SELENOOQ9BVL4 669 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 MOV10Q9HCE1 1003 aaKnown RBP4.7□□□□□ -1.66
UBR3-209ENST00000477461 PNPLA8Q9NP80 782 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 ASXL1Q8IXJ9 1541 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 DLC1Q96QB1 1528 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 QRICH2Q9H0J4 1663 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 SPATA31A1Q5TZJ5 1347 aa4.7□□□□□ -1.66
UBR3-209ENST00000477461 CPS1P31327 1500 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 CCDC194A0A1B0GVG4 234 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 PLIN1O60240 522 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 ANXA2P07355 339 aaKnown RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 NBPF7P0C2Y1 421 aaPredicted RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 TMF1P82094 1093 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 ACOX1Q15067 660 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 ZNF585BQ52M93 769 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 NUGGCQ68CJ6 796 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.69□□□□□ -1.66
UBR3-209ENST00000477461 RNF152Q8N8N0 203 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 SMRP1Q8NCR6 262 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 MBD3L2Q8NHZ7 208 aaPredicted RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 BRI3BPQ8WY22 251 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 CELF1Q92879 486 aaKnown RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 FAM227BQ96M60 508 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 PRAM1Q96QH2 718 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 POLR3GLQ9BT43 218 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 STARD7Q9NQZ5 370 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 FAM50BQ9Y247 325 aa4.69□□□□□ -1.66
UBR3-209ENST00000477461 XRN1Q8IZH2 1706 aaKnown RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 NKTRP30414 1462 aaKnown RBP4.69□□□□□ -1.66
UBR3-209ENST00000477461 PRYO14603 147 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 AREL1O15033 823 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 CTIFO43310 598 aaKnown RBP4.68□□□□□ -1.66
UBR3-209ENST00000477461 T-ENOLP0DO92 83 aa4.68□□□□□ -1.66
UBR3-209ENST00000477461 TSHRP16473 764 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms