RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZNF618Q5T7W0 954 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 PRRT2Q7Z6L0 340 aaPredicted RBP11.29□□□□□ -0.6
COL27A1-204ENST00000477421 TTC7BQ86TV6 843 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 MIPOL1Q8TD10 442 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 MARK4Q96L34 752 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 NMUR2Q9GZQ4 415 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
COL27A1-204ENST00000477421 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 GGA2Q9UJY4 613 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
COL27A1-204ENST00000477421 GLI3P10071 1580 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 GNGT2O14610 69 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TIMM44O43615 452 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 NDUFS3O75489 264 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 METTL18O95568 372 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 EDN1P05305 212 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TSPAN8P19075 237 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 USP4Q13107 963 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CNGA3Q16281 694 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 FAM83EQ2M2I3 478 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SMARCD1Q96GM5 515 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SERAC1Q96JX3 654 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 FGD4Q96M96 766 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CATSPER2Q96P56 530 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MUC3BQ9H195 1237 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SPATS2LQ9NUQ6 558 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SMPD4Q9NXE4 827 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MPP6Q9NZW5 540 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 C15orf41Q9Y2V0 281 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MYO18AQ92614 2054 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MYH7BA7E2Y1 1941 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MSI1O43347 362 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 DNAJC6O75061 913 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SEC24DO94855 1032 aaPredicted RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 PIGRP01833 764 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MSX2P35548 267 aaPredicted RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 VHLP40337 213 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MRPS5P82675 430 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 ARHGAP1Q07960 439 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TAF2Q6P1X5 1199 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 EP400NLQ6ZTU2 488 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CCNJLQ8IV13 435 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SUGP1Q8IWZ8 645 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 ST13P4Q8IZP2 240 aaPredicted RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TRIML2Q8N7C3 387 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CERS2Q96G23 380 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TRIM62Q9BVG3 475 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 ARL8BQ9NVJ2 186 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CDYLQ9Y232 598 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CRYL1Q9Y2S2 319 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 FBXO21O94952 628 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 PGAM1P18669 254 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CDH17Q12864 832 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 LINC00523Q86TU6 105 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 DCP1BQ8IZD4 617 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TDRD5Q8NAT2 981 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 SLC44A1Q8WWI5 657 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 DMAP1Q9NPF5 467 aaPredicted RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 TAGLN3Q9UI15 199 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 ARHGAP26Q9UNA1 814 aa11.28□□□□□ -0.6
COL27A1-204ENST00000477421 AAR2Q9Y312 384 aaKnown RBP11.28□□□□□ -0.6
COL27A1-204ENST00000477421 MYBPHLA2RUH7 354 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 KRT36O76013 467 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 SERPINE1P05121 402 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 AKR1A1P14550 325 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 CHRM3P20309 590 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 LILRA4P59901 499 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 MED21Q13503 144 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 FLOT2Q14254 428 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 SOWAHAQ2M3V2 549 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 PARP6Q2NL67 630 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 SEL1L3Q68CR1 1132 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 RNF43Q68DV7 783 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 CLNKQ7Z7G1 428 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 MFSD3Q96ES6 412 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 MRPL1Q9BYD6 325 aaKnown RBP11.27□□□□□ -0.6
COL27A1-204ENST00000477421 XYLT2Q9H1B5 865 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 CITO14578 2027 aa11.27□□□□□ -0.6
COL27A1-204ENST00000477421 ERI2A8K979 691 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TRDMT1O14717 391 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TRIM13O60858 407 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 TOP3BO95985 862 aaKnown RBP11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ITGA2BP08514 1039 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 ALADP13716 330 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 KLRC2P26717 231 aa11.27□□□□□ -0.61
COL27A1-204ENST00000477421 SCNN1BP51168 640 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms