RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PIGKQ92643 395 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 FCRL5Q96RD9 977 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 PIGSQ96S52 555 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 ABHD14AQ9BUJ0 271 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 TWSG1Q9GZX9 223 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 PDE11AQ9HCR9 933 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 RCE1Q9Y256 329 aa5.54□□□□□ -1.52
PTCD3-211ENST00000476215 EIF3FO00303 357 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 NPHP1O15259 732 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 CNTN5O94779 1100 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 ENO1P06733 434 aaKnown RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 CELA2AP08217 269 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 ALDOCP09972 364 aaKnown RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 IGFBP2P18065 325 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 MPGP29372 298 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 MCM2P49736 904 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 PAPOLAP51003 745 aaKnown RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 YPEL5P62699 121 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 MTA1Q13330 715 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 DCTN1Q14203 1278 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 TAF12Q16514 161 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 ANXA2RQ3ZCQ2 193 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 MIS18BP1Q6P0N0 1132 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 KIAA1324Q6UXG2 1013 aaKnown RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 RFX6Q8HWS3 928 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 UEVLDQ8IX04 471 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 ADGRF3Q8IZF5 1079 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 TMEM57Q8N5G2 664 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 FSIP1Q8NA03 581 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 CEP70Q8NHQ1 597 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 PYM1Q9BRP8 204 aaKnown RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 TM2D2Q9BX73 214 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 OSBPL5Q9H0X9 879 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-211ENST00000476215 SFXN1Q9H9B4 322 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 PDGFCQ9NRA1 345 aa5.53□□□□□ -1.52
PTCD3-211ENST00000476215 SPATA31A5Q5VU36 1347 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 SPATA31A7Q8IWB4 1347 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 WDR17Q8IZU2 1322 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-211ENST00000476215 INPPL1O15357 1258 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 SEPT4O43236 478 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 HNRNPRO43390 633 aaKnown RBP5.52□□□□□ -1.53
PTCD3-211ENST00000476215 TUBB4AP04350 444 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 RFPL3SP0C7P2 107 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 ST6GAL1P15907 406 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 CERS1P27544 350 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 MAPK9P45984 424 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 SSBP2P81877 361 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-211ENST00000476215 CEP78Q5JTW2 689 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 RHPN2Q8IUC4 686 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 HERC6Q8IVU3 1022 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 DDB2Q92466 427 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 MAP4K1Q92918 833 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 ARRDC3Q96B67 414 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 P2RY11Q96G91 374 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 COG8Q96MW5 612 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 SH2D3AQ9BRG2 576 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-211ENST00000476215 RMI1Q9H9A7 625 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 PLEKHA2Q9HB19 425 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 KLHL13Q9P2N7 655 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 DERAQ9Y315 318 aa5.52□□□□□ -1.53
PTCD3-211ENST00000476215 EMSYQ7Z589 1322 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 DNAJC9-AS1A6NH13 148 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 GRM8O00222 908 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 PPP6CO00743 305 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 DSCR3O14972 297 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 PLAUP00749 431 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 AKR1A1P14550 325 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 CHN1P15882 459 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 TGM2P21980 687 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 CDK18Q07002 472 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 HSP90AB4PQ58FF6 505 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 RBM44Q6ZP01 1051 aaKnown RBP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 RASGRP2Q7LDG7 609 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 ANKS1BQ7Z6G8 1248 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 PTGR2Q8N8N7 351 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 KTI12Q96EK9 354 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 UBXN10Q96LJ8 280 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 GATA5Q9BWX5 397 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 SEMA4CQ9C0C4 833 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 ARHGAP39Q9C0H5 1083 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 CLPBQ9H078 707 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 RRN3Q9NYV6 651 aa5.51□□□□□ -1.53
PTCD3-211ENST00000476215 RRP7AQ9Y3A4 280 aaKnown RBP5.51□□□□□ -1.53
PTCD3-211ENST00000476215 STX16-NPEPL1H3BU86 382 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 STX16O14662 325 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 LMO1P25800 156 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 EPHB2P29323 1055 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 SOX2P48431 317 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 B4GALNT1Q00973 533 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 SRSF4Q08170 494 aaKnown RBP5.5□□□□□ -1.53
PTCD3-211ENST00000476215 GPR162Q16538 588 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 ZNF484Q5JVG2 852 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 CYP26C1Q6V0L0 522 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 CNGA4Q8IV77 575 aa5.5□□□□□ -1.53
PTCD3-211ENST00000476215 GALNT16Q8N428 558 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms