RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 MBD1Q9UIS9 605 aaPredicted RBP14.27□□□□□ -0.13
TMCO1-205ENST00000476143 A0A1B0GVM2 712 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 DCDC2BA2VCK2 349 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 TCAF2A6NFQ2 919 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 GDF9O60383 454 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 GFPT2O94808 682 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 DNTTP04053 509 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 CFIP05156 583 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 PRKCHP24723 683 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 CD70P32970 193 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 SOX5P35711 763 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 SGSHP51688 502 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 SULT2A1Q06520 285 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 SLC12A1Q13621 1099 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 TAF5Q15542 800 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 DUOXA1Q1HG43 343 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 FILIP1LQ4L180 1135 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 ADIPOR2Q86V24 386 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 CFAP52Q8N1V2 620 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 P2RY11Q96G91 374 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
TMCO1-205ENST00000476143 RPRD1AQ96P16 312 aaPredicted RBP14.26□□□□□ -0.13
TMCO1-205ENST00000476143 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 TMEM9BQ9NQ34 198 aa14.26□□□□□ -0.13
TMCO1-205ENST00000476143 LIMA1Q9UHB6 759 aaKnown RBP14.26□□□□□ -0.13
TMCO1-205ENST00000476143 CKAP5Q14008 2032 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 CEP250Q9BV73 2442 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 LGALS16A8MUM7 142 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 SRPRAP08240 638 aaKnown RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 HLA-EP13747 358 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 DESP17661 470 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 PTMSP20962 102 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 PTGER3P43115 390 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 TPM4P67936 248 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 ZBTB16Q05516 673 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 DEUP1Q05D60 604 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 GFPT1Q06210 699 aaPredicted RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 TYRO3Q06418 890 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 CAMK2GQ13555 558 aaPredicted RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 BRMS1LQ5PSV4 323 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 TCEAL6Q6IPX3 200 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 LRRC31Q6UY01 552 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 KIAA0907Q7Z7F0 614 aaPredicted RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 CACUL1Q86Y37 369 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 FRMD1Q8N878 549 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 KDM1BQ8NB78 822 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 EPS8L1Q8TE68 723 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 TCEAL3Q969E4 200 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 HSPA12BQ96MM6 686 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 NUP58Q9BVL2 599 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 MKRN2Q9H000 416 aaKnown RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 SLC6A17Q9H1V8 727 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 GANQ9H2C0 597 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 ITM2CQ9NQX7 267 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
TMCO1-205ENST00000476143 NCKAP1Q9Y2A7 1128 aa14.25□□□□□ -0.13
TMCO1-205ENST00000476143 ATXN2Q99700 1313 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 LNP1A1A4G5 178 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 GOLGA8SH3BPF8 625 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 SYPP08247 313 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 MMEP08473 750 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 ITPKAP23677 461 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 CSKP41240 450 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 GABRB2P47870 512 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 TPMTP51580 245 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 CDR2Q01850 454 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 ZNF177Q13360 481 aaPredicted RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 PPM1JQ5JR12 505 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 PITRM1Q5JRX3 1037 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 NAA35Q5VZE5 725 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 ZNF776Q68DI1 518 aaPredicted RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 CCAR2Q8N163 923 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 HDDC3Q8N4P3 179 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 DEFB119Q8N690 84 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 CADM4Q8NFZ8 388 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 WFDC5Q8TCV5 224 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 GANCQ8TET4 914 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 TTC17Q96AE7 1141 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 TOE1Q96GM8 510 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 TMEM245Q9H330 911 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 CD248Q9HCU0 757 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 SEPT11Q9NVA2 429 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 XPO7Q9UIA9 1087 aaKnown RBP14.24□□□□□ -0.13
TMCO1-205ENST00000476143 SLC25A13Q9UJS0 675 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 PILRBQ9UKJ0 227 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 SCML1Q9UN30 329 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 SLC6A14Q9UN76 642 aa14.24□□□□□ -0.13
TMCO1-205ENST00000476143 TNRC6BQ9UPQ9 1833 aaKnown RBP14.23□□□□□ -0.13
TMCO1-205ENST00000476143 ANKRD62A6NC57 917 aa14.23□□□□□ -0.13
TMCO1-205ENST00000476143 CLDN11O75508 207 aa14.23□□□□□ -0.13
TMCO1-205ENST00000476143 NSFP46459 744 aaKnown RBP14.23□□□□□ -0.13
TMCO1-205ENST00000476143 COPAP53621 1224 aa14.23□□□□□ -0.13
TMCO1-205ENST00000476143 NOMO3P69849 1222 aa14.23□□□□□ -0.13
TMCO1-205ENST00000476143 PITX1P78337 314 aaPredicted RBP14.23□□□□□ -0.13
TMCO1-205ENST00000476143 ECT2LQ008S8 904 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms