RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TRIM24O15164 1050 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 ACSL4O60488 711 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 LRCH4O75427 683 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 PAGE1O75459 146 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 MTA2O94776 668 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 MOCS2O96007 188 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 PRB1P04280 392 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 IL1R2P27930 398 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SDC4P31431 198 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 OPRD1P41143 372 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 MAGEA1P43355 309 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 KPNA1P52294 538 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 STARD6P59095 220 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 RPS24P62847 133 aaKnown RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 DEUP1Q05D60 604 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 FZD5Q13467 585 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 RUNX3Q13761 415 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 PDGFRLQ15198 375 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SF3A2Q15428 464 aaKnown RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 CDO1Q16878 200 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 COL28A1Q2UY09 1125 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 AASDHQ4L235 1098 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SLC44A4Q53GD3 710 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 MS4A13Q5J8X5 152 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 ADGRF1Q5T601 910 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 FAM72AQ5TYM5 149 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 FYB2Q5VWT5 728 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 FAM72DQ6L9T8 149 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 DCUN1D2Q6PH85 259 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 STRADAQ7RTN6 431 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 FAM72BQ86X60 149 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 ETFBKMTQ8IXQ9 262 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 PHTF2Q8N3S3 785 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 CPXM2Q8N436 756 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SLC35G2Q8TBE7 412 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 EZH1Q92800 747 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 IRF7Q92985 503 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 PRICKLE1Q96MT3 831 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 ZNF830Q96NB3 372 aaPredicted RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SCNM1Q9BWG6 230 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 HEBP1Q9NRV9 189 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 CACNA2D2Q9NY47 1150 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 RRN3Q9NYV6 651 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 MARK1Q9P0L2 795 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 TRIM10Q9UDY6 481 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 HCN2Q9UL51 889 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 INTUQ9ULD6 942 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 NEU3Q9UQ49 428 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SH3BP1Q9Y3L3 701 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 ADGRG1Q9Y653 693 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 HS3ST4Q9Y661 456 aa7.24□□□□□ -1.25
LIMD1-204ENST00000474665 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
LIMD1-204ENST00000474665 KANSL1LA0AUZ9 987 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 FAM170BA6NMN3 283 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SPECC1L-ADORA2AF8WAN1 911 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SLC9A3R1O14745 358 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 PJA2O43164 708 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 HOXC11O43248 304 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 TSPAN3O60637 253 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 LATS1O95835 1130 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 F9P00740 461 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 PENKP01210 267 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CISD3P0C7P0 127 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CD72P21854 359 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 PSMA2P25787 234 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 HOXD9P28356 352 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 MIPP30301 263 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CCR1P32246 355 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CTHP32929 405 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 GJA4P35212 333 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 RDXP35241 583 aaKnown RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ADRA1BP35368 520 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CYLC1P35663 651 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ARHGAP25P42331 645 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SLC6A11P48066 632 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 IFNAR2P48551 515 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 HARS2P49590 506 aaKnown RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 LIMK1P53667 647 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 MLLT6P55198 1093 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 TAS2R40P59535 323 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SLC25A11Q02978 314 aaKnown RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SCAPQ12770 1279 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 SEMA3BQ13214 749 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 AUHQ13825 339 aaKnown RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 NUMA1Q14980 2115 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 UBXN2BQ14CS0 331 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CA9Q16790 459 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 ITPRIPL2Q3MIP1 535 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 C5orf22Q49AR2 442 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 C10orf76Q5T2E6 689 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 MANEALQ5VSG8 457 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 RAP1GAP2Q684P5 730 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 NUGGCQ68CJ6 796 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 FBXL22Q6P050 247 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 CC2D1AQ6P1N0 951 aaPredicted RBP7.23□□□□□ -1.25
LIMD1-204ENST00000474665 TPGS1Q6ZTW0 290 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 UNC45BQ8IWX7 931 aa7.23□□□□□ -1.25
LIMD1-204ENST00000474665 YAF2Q8IY57 180 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms