RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 AP1ARQ63HQ0 302 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 ACAD11Q709F0 780 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 PRRT2Q7Z6L0 340 aaPredicted RBP14.44□□□□□ -0.1
RPGR-206ENST00000474584 FAM131BQ86XD5 332 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 PSTKQ8IV42 348 aaKnown RBP14.44□□□□□ -0.1
RPGR-206ENST00000474584 PYROXD2Q8N2H3 581 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 SREK1Q8WXA9 508 aaKnown RBP14.44□□□□□ -0.1
RPGR-206ENST00000474584 CCDC124Q96CT7 223 aaKnown RBP14.44□□□□□ -0.1
RPGR-206ENST00000474584 TUBGCP5Q96RT8 1024 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 DPEP3Q9H4B8 488 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 ZDHHC7Q9NXF8 308 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 IL1RAPL1Q9NZN1 696 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 RPS6KL1Q9Y6S9 549 aa14.44□□□□□ -0.1
RPGR-206ENST00000474584 SF3B1O75533 1304 aaKnown RBP eCLIP14.43□□□□□ -0.18e-6■■■■■ 107
RPGR-206ENST00000474584 IRF6O14896 467 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PDE5AO76074 875 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ERVK-10P10266 1014 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 SERPINB8P50452 374 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 POLE2P56282 527 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 XIAPP98170 497 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PDSS2Q86YH6 399 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ARHGAP18Q8N392 663 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 CCNYQ8ND76 341 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 BEST2Q8NFU1 509 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 DDX50Q9BQ39 737 aaKnown RBP14.43□□□□□ -0.1
RPGR-206ENST00000474584 EBF3Q9H4W6 596 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 TXNRD2Q9NNW7 524 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 SNX15Q9NRS6 342 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ADAM28Q9UKQ2 775 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 FZD10Q9ULW2 581 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PRKCGP05129 697 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 MATKP42679 507 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 SULT1E1P49888 294 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 IFRD2Q12894 506 aaPredicted RBP14.43□□□□□ -0.1
RPGR-206ENST00000474584 CUL3Q13618 768 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 CCNIQ14094 377 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 SMAD1Q15797 465 aaKnown RBP14.43□□□□□ -0.1
RPGR-206ENST00000474584 VWA5B1Q5TIE3 1220 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PGM2L1Q6PCE3 622 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 DEFB107AQ8IZN7 70 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ST13P4Q8IZP2 240 aaPredicted RBP14.43□□□□□ -0.1
RPGR-206ENST00000474584 NME8Q8N427 588 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 RNF139Q8WU17 664 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 OTUD5Q96G74 571 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 CENPKQ9BS16 269 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 SHCBP1LQ9BZQ2 653 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 KLHL4Q9C0H6 718 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 DNAI2Q9GZS0 605 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PPP1R1BQ9UD71 204 aaPredicted RBP14.43□□□□□ -0.1
RPGR-206ENST00000474584 TUBGCP4Q9UGJ1 667 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PCDHB12Q9Y5F1 795 aa14.43□□□□□ -0.1
RPGR-206ENST00000474584 PDCD11Q14690 1871 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 ZNF195O14628 629 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SNUPNO95149 360 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 HSPA4LO95757 839 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 PRDX6P30041 224 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 ARRB2P32121 409 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SERPINB6P35237 376 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SPRP35270 261 aaPredicted RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 MLH1P40692 756 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 RPL34P49207 117 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 TBL3Q12788 808 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 MED21Q13503 144 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SLC25A52Q3SY17 297 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 MTHFD1LQ6UB35 978 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SHKBP1Q8TBC3 707 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 SNX27Q96L92 541 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 ZMAT2Q96NC0 199 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 RBBP8Q99708 897 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 LPIN3Q9BQK8 851 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 CPSF2Q9P2I0 782 aaKnown RBP14.42□□□□□ -0.1
RPGR-206ENST00000474584 POMPQ9Y244 141 aa14.42□□□□□ -0.1
RPGR-206ENST00000474584 ASB14A6NK59 587 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 DCXO43602 365 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 ZNF286BP0CG31 522 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 ITGAXP20702 1163 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 LRRC36Q1X8D7 754 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 FRMD7Q6ZUT3 714 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 CMC1Q7Z7K0 106 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 FBXW8Q8N3Y1 598 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 DCLK2Q8N568 766 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 ISL2Q96A47 359 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 FAM149B1Q96BN6 582 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 HSFY1Q96LI6 401 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 KCNK16Q96T55 309 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 SNTG2Q9NY99 539 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 KPNA7A9QM74 516 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 RNASEH1O60930 286 aaKnown RBP14.41□□□□□ -0.1
RPGR-206ENST00000474584 ZNF189O75820 626 aaPredicted RBP14.41□□□□□ -0.1
RPGR-206ENST00000474584 PDGFRBP09619 1106 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 ACAT1P24752 427 aaKnown RBP14.41□□□□□ -0.1
RPGR-206ENST00000474584 MAGEA12P43365 314 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 LIMK2P53671 638 aa14.41□□□□□ -0.1
RPGR-206ENST00000474584 GJC2Q5T442 439 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms