RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PGGT1BP53609 377 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 BST2Q10589 180 aaKnown RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 IRGCQ6NXR0 463 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 LRRC8BQ6P9F7 803 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 KYAT3Q6YP21 454 aaKnown RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 TNS4Q8IZW8 715 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 DEFB106AQ8N104 65 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ANKRD52Q8NB46 1076 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 PPTC7Q8NI37 304 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 EZH1Q92800 747 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ATXN7L3BQ96GX2 97 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 TTC1Q99614 292 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF184Q99676 751 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 KATNBL1Q9H079 304 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ACSS2Q9NR19 701 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 CHCHD3Q9NX63 227 aaKnown RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 MORF4L1Q9UBU8 362 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 FZD10Q9ULW2 581 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ASB3Q9Y575 518 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 FAM72CH0Y354 149 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 KCNK1O00180 336 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 PROCP04070 461 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 NDUFV1P49821 464 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 CDK18Q07002 472 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 LBRQ14739 615 aaKnown RBP11.24□□□□□ -0.61
C9orf3-214ENST00000473778 GRIK4Q16099 956 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 FAM72AQ5TYM5 149 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SYPL2Q5VXT5 272 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 FAM72DQ6L9T8 149 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ALKAL1Q6UXT8 129 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 NAPRTQ6XQN6 538 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 RAPH1Q70E73 1250 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 FAM72BQ86X60 149 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ERO1BQ86YB8 467 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ZDHHC17Q8IUH5 632 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ZNF567Q8N184 647 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 PHTF2Q8N3S3 785 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 ACVR1CQ8NER5 493 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 CFAP61Q8NHU2 1237 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 C1orf21Q9H246 121 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 KLK14Q9P0G3 267 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 SEPT10Q9P0V9 454 aa11.24□□□□□ -0.61
C9orf3-214ENST00000473778 CLDN5O00501 218 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 BUD23O43709 281 aaKnown RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 ZMPSTE24O75844 475 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 RECQL4O94761 1208 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 GJA5P36382 358 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 IDH3AP50213 366 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 ADIGQ0VDE8 80 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 LAMC2Q13753 1193 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 DLG2Q15700 870 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 C1orf146Q5VVC0 180 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 HFE2Q6ZVN8 426 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 NT5DC4Q86YG4 428 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 TTC39CQ8N584 583 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PYDC1Q8WXC3 89 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 AGAP2Q99490 1192 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 ADAMTS10Q9H324 1103 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PRDM12Q9H4Q4 367 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 FAM124BQ9H5Z6 455 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 SETD4Q9NVD3 440 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 COPG2Q9UBF2 871 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 SOX13Q9UN79 622 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 DICER1Q9UPY3 1922 aaKnown RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 TRIP12Q14669 1992 aaPredicted RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PLXNB2O15031 1838 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 SMIM24O75264 130 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 GLRA3O75311 464 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PDE5AO76074 875 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MLNP12872 115 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MATKP42679 507 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 BCAT1P54687 386 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MXRA7P84157 204 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 USP4Q13107 963 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 ITGA9Q13797 1035 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 TRMT5Q32P41 509 aaKnown RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 DCAF6Q58WW2 860 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 IZUMO2Q6UXV1 221 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 C4orf22Q6V702 233 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 CTU1Q7Z7A3 348 aaKnown RBP11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 OR6Y1Q8NGX8 325 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PPP1R14CQ8TAE6 165 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MAPK15Q8TD08 544 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 RNF139Q8WU17 664 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 TMEM40Q8WWA1 233 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 AGAP3Q96P47 875 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 OSMRQ99650 979 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 CAB39LQ9H9S4 337 aa11.23□□□□□ -0.61
C9orf3-214ENST00000473778 MAN1C1Q9NR34 630 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms